Gene : Thecc1EG026378 T. cacao v1.1

Defline:  (1 of 1) PTHR12175//PTHR12175:SF2 - AD039 HT014 THIOREDOXIN FAMILY TRP26 // SUBFAMILY NOT NAMED Genomic Order:  2851
Name:  ? Thecc1EG026378 Secondary Identifier:  ? PAC:27424275

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026378 0.5kb upstream 0.5kb upstream 3395 true scaffold_5: 37963418-37966812 Theobroma cacao
Thecc1EG026378 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 37966313-37966812 Theobroma cacao
Thecc1EG026378 0.5kb downstream 0.5kb downstream 3395 true scaffold_5: 37962918-37966312 Theobroma cacao
Thecc1EG026378 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 37962918-37963417 Theobroma cacao
Thecc1EG026378 1.0kb upstream 1.0kb upstream 3895 true scaffold_5: 37963418-37967312 Theobroma cacao
Thecc1EG026378 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 37966313-37967312 Theobroma cacao
Thecc1EG026378 1.0kb downstream 1.0kb downstream 3895 true scaffold_5: 37962418-37966312 Theobroma cacao
Thecc1EG026378 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 37962418-37963417 Theobroma cacao
Thecc1EG026378 2.0kb upstream 2.0kb upstream 4895 true scaffold_5: 37963418-37968312 Theobroma cacao
Thecc1EG026378 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 37966313-37968312 Theobroma cacao
Thecc1EG026378 2.0kb downstream 2.0kb downstream 4895 true scaffold_5: 37961418-37966312 Theobroma cacao
Thecc1EG026378 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 37961418-37963417 Theobroma cacao
Thecc1EG026378 5.0kb upstream 5.0kb upstream 7895 true scaffold_5: 37963418-37971312 Theobroma cacao
Thecc1EG026378 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 37966313-37971312 Theobroma cacao
Thecc1EG026378 5.0kb downstream 5.0kb downstream 7895 true scaffold_5: 37958418-37966312 Theobroma cacao
Thecc1EG026378 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 37958418-37963417 Theobroma cacao
Thecc1EG026378 10.0kb upstream 10.0kb upstream 12895 true scaffold_5: 37963418-37976312 Theobroma cacao
Thecc1EG026378 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 37966313-37976312 Theobroma cacao
Thecc1EG026378 10.0kb downstream 10.0kb downstream 12895 true scaffold_5: 37953418-37966312 Theobroma cacao
Thecc1EG026378 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 37953418-37963417 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829080 5264 Brassicales-Malvales View MSA
124344369 5266 SBM View MSA
124240612 5268 Malvidae View MSA
124066560 5270 Rosid View MSA
123737350 5271 Pentapetalae View MSA
122790489 5272 Eudicot View MSA
122044030 5273 Angiosperm View MSA
121346972 5274 Embryophyte View MSA
123424036 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain