Gene : Thecc1EG026352 T. cacao v1.1
Defline:  Calcium-binding EF hand family protein (60%P) Genomic Order:  2827
Name:  ? Thecc1EG026352 Secondary Identifier:  ? PAC:27423219
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026352 0.5kb upstream 0.5kb upstream 4154 true scaffold_5: 37836675-37840828 Theobroma cacao
Thecc1EG026352 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 37840329-37840828 Theobroma cacao
Thecc1EG026352 0.5kb downstream 0.5kb downstream 4154 true scaffold_5: 37836175-37840328 Theobroma cacao
Thecc1EG026352 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 37836175-37836674 Theobroma cacao
Thecc1EG026352 1.0kb upstream 1.0kb upstream 4654 true scaffold_5: 37836675-37841328 Theobroma cacao
Thecc1EG026352 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 37840329-37841328 Theobroma cacao
Thecc1EG026352 1.0kb downstream 1.0kb downstream 4654 true scaffold_5: 37835675-37840328 Theobroma cacao
Thecc1EG026352 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 37835675-37836674 Theobroma cacao
Thecc1EG026352 2.0kb upstream 2.0kb upstream 5654 true scaffold_5: 37836675-37842328 Theobroma cacao
Thecc1EG026352 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 37840329-37842328 Theobroma cacao
Thecc1EG026352 2.0kb downstream 2.0kb downstream 5654 true scaffold_5: 37834675-37840328 Theobroma cacao
Thecc1EG026352 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 37834675-37836674 Theobroma cacao
Thecc1EG026352 5.0kb upstream 5.0kb upstream 8654 true scaffold_5: 37836675-37845328 Theobroma cacao
Thecc1EG026352 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 37840329-37845328 Theobroma cacao
Thecc1EG026352 5.0kb downstream 5.0kb downstream 8654 true scaffold_5: 37831675-37840328 Theobroma cacao
Thecc1EG026352 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 37831675-37836674 Theobroma cacao
Thecc1EG026352 10.0kb upstream 10.0kb upstream 13654 true scaffold_5: 37836675-37850328 Theobroma cacao
Thecc1EG026352 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 37840329-37850328 Theobroma cacao
Thecc1EG026352 10.0kb downstream 10.0kb downstream 13654 true scaffold_5: 37826675-37840328 Theobroma cacao
Thecc1EG026352 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 37826675-37836674 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829747 5264 Brassicales-Malvales View MSA
124342711 5266 SBM View MSA
124238562 5268 Malvidae View MSA
124064185 5270 Rosid View MSA
123739646 5271 Pentapetalae View MSA
122789381 5272 Eudicot View MSA
122043203 5273 Angiosperm View MSA
121346779 5274 Embryophyte View MSA
123380443 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain