Gene : Thecc1EG026340 T. cacao v1.1
Defline:  (1 of 2) PTHR22595//PTHR22595:SF62 - CHITINASE-RELATED // HEVEIN-LIKE PREPROPROTEIN Genomic Order:  2815
Name:  ? Thecc1EG026340 Secondary Identifier:  ? PAC:27422515
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026340 0.5kb upstream 0.5kb upstream 1438 true scaffold_5: 37761863-37763300 Theobroma cacao
Thecc1EG026340 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 37762801-37763300 Theobroma cacao
Thecc1EG026340 0.5kb downstream 0.5kb downstream 1438 true scaffold_5: 37761363-37762800 Theobroma cacao
Thecc1EG026340 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 37761363-37761862 Theobroma cacao
Thecc1EG026340 1.0kb upstream 1.0kb upstream 1938 true scaffold_5: 37761863-37763800 Theobroma cacao
Thecc1EG026340 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 37762801-37763800 Theobroma cacao
Thecc1EG026340 1.0kb downstream 1.0kb downstream 1938 true scaffold_5: 37760863-37762800 Theobroma cacao
Thecc1EG026340 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 37760863-37761862 Theobroma cacao
Thecc1EG026340 2.0kb upstream 2.0kb upstream 2938 true scaffold_5: 37761863-37764800 Theobroma cacao
Thecc1EG026340 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 37762801-37764800 Theobroma cacao
Thecc1EG026340 2.0kb downstream 2.0kb downstream 2938 true scaffold_5: 37759863-37762800 Theobroma cacao
Thecc1EG026340 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 37759863-37761862 Theobroma cacao
Thecc1EG026340 5.0kb upstream 5.0kb upstream 5938 true scaffold_5: 37761863-37767800 Theobroma cacao
Thecc1EG026340 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 37762801-37767800 Theobroma cacao
Thecc1EG026340 5.0kb downstream 5.0kb downstream 5938 true scaffold_5: 37756863-37762800 Theobroma cacao
Thecc1EG026340 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 37756863-37761862 Theobroma cacao
Thecc1EG026340 10.0kb upstream 10.0kb upstream 10938 true scaffold_5: 37761863-37772800 Theobroma cacao
Thecc1EG026340 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 37762801-37772800 Theobroma cacao
Thecc1EG026340 10.0kb downstream 10.0kb downstream 10938 true scaffold_5: 37751863-37762800 Theobroma cacao
Thecc1EG026340 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 37751863-37761862 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826929 5264 Brassicales-Malvales View MSA
124321239 5266 SBM View MSA
124249005 5268 Malvidae View MSA
124067822 5270 Rosid View MSA
123742703 5271 Pentapetalae View MSA
122790413 5272 Eudicot View MSA
122047650 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain