Gene : Thecc1EG026343 T. cacao v1.1
Defline:  (1 of 1) PTHR31734//PTHR31734:SF28 - FAMILY NOT NAMED // AUXIN-RESPONSIVE PROTEIN IAA16 Genomic Order:  2818
Name:  ? Thecc1EG026343 Secondary Identifier:  ? PAC:27425005
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026343 0.5kb upstream 0.5kb upstream 2466 true scaffold_5: 37778485-37780950 Theobroma cacao
Thecc1EG026343 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 37780451-37780950 Theobroma cacao
Thecc1EG026343 0.5kb downstream 0.5kb downstream 2466 true scaffold_5: 37777985-37780450 Theobroma cacao
Thecc1EG026343 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 37777985-37778484 Theobroma cacao
Thecc1EG026343 1.0kb upstream 1.0kb upstream 2966 true scaffold_5: 37778485-37781450 Theobroma cacao
Thecc1EG026343 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 37780451-37781450 Theobroma cacao
Thecc1EG026343 1.0kb downstream 1.0kb downstream 2966 true scaffold_5: 37777485-37780450 Theobroma cacao
Thecc1EG026343 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 37777485-37778484 Theobroma cacao
Thecc1EG026343 2.0kb upstream 2.0kb upstream 3966 true scaffold_5: 37778485-37782450 Theobroma cacao
Thecc1EG026343 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 37780451-37782450 Theobroma cacao
Thecc1EG026343 2.0kb downstream 2.0kb downstream 3966 true scaffold_5: 37776485-37780450 Theobroma cacao
Thecc1EG026343 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 37776485-37778484 Theobroma cacao
Thecc1EG026343 5.0kb upstream 5.0kb upstream 6966 true scaffold_5: 37778485-37785450 Theobroma cacao
Thecc1EG026343 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 37780451-37785450 Theobroma cacao
Thecc1EG026343 5.0kb downstream 5.0kb downstream 6966 true scaffold_5: 37773485-37780450 Theobroma cacao
Thecc1EG026343 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 37773485-37778484 Theobroma cacao
Thecc1EG026343 10.0kb upstream 10.0kb upstream 11966 true scaffold_5: 37778485-37790450 Theobroma cacao
Thecc1EG026343 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 37780451-37790450 Theobroma cacao
Thecc1EG026343 10.0kb downstream 10.0kb downstream 11966 true scaffold_5: 37768485-37780450 Theobroma cacao
Thecc1EG026343 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 37768485-37778484 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827922 5264 Brassicales-Malvales View MSA
124339044 5266 SBM View MSA
124239552 5268 Malvidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain