Gene : Pavir.J568700 P. virgatum v4.1
Defline:  (1 of 22) PF11443 - Domain of unknown function (DUF2828) (DUF2828) Genomic Order:  1
Name:  ? Pavir.J568700 Secondary Identifier:  ? PAC:37678702
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J568700 0.5kb upstream 0.5kb upstream 2777 true scaffold_512: 5340-8116 Panicum virgatum
Pavir.J568700 0.5kb upstream 0.5kb upstream 500 false scaffold_512: 7617-8116 Panicum virgatum
Pavir.J568700 0.5kb downstream 0.5kb downstream 2777 true scaffold_512: 4840-7616 Panicum virgatum
Pavir.J568700 0.5kb downstream 0.5kb downstream 500 false scaffold_512: 4840-5339 Panicum virgatum
Pavir.J568700 1.0kb upstream 1.0kb upstream 3277 true scaffold_512: 5340-8616 Panicum virgatum
Pavir.J568700 1.0kb upstream 1.0kb upstream 1000 false scaffold_512: 7617-8616 Panicum virgatum
Pavir.J568700 1.0kb downstream 1.0kb downstream 3277 true scaffold_512: 4340-7616 Panicum virgatum
Pavir.J568700 1.0kb downstream 1.0kb downstream 1000 false scaffold_512: 4340-5339 Panicum virgatum
Pavir.J568700 2.0kb upstream 2.0kb upstream 4277 true scaffold_512: 5340-9616 Panicum virgatum
Pavir.J568700 2.0kb upstream 2.0kb upstream 2000 false scaffold_512: 7617-9616 Panicum virgatum
Pavir.J568700 2.0kb downstream 2.0kb downstream 4277 true scaffold_512: 3340-7616 Panicum virgatum
Pavir.J568700 2.0kb downstream 2.0kb downstream 2000 false scaffold_512: 3340-5339 Panicum virgatum
Pavir.J568700 5.0kb upstream 5.0kb upstream 7277 true scaffold_512: 5340-12616 Panicum virgatum
Pavir.J568700 5.0kb upstream 5.0kb upstream 5000 false scaffold_512: 7617-12616 Panicum virgatum
Pavir.J568700 5.0kb downstream 5.0kb downstream 7277 true scaffold_512: 340-7616 Panicum virgatum
Pavir.J568700 5.0kb downstream 5.0kb downstream 5000 false scaffold_512: 340-5339 Panicum virgatum
Pavir.J568700 10.0kb upstream 10.0kb upstream 12277 true scaffold_512: 5340-17616 Panicum virgatum
Pavir.J568700 10.0kb upstream 10.0kb upstream 10000 false scaffold_512: 7617-17616 Panicum virgatum
Pavir.J568700 10.0kb downstream 10.0kb downstream 7616 true scaffold_512: 1-7616 Panicum virgatum
Pavir.J568700 10.0kb downstream 10.0kb downstream 5339 false scaffold_512: 1-5339 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031228 5273 Angiosperm View MSA
122106844 5267 Panicoideae Singleton cluster - no MSA
124402877 5269 Grass Singleton cluster - no MSA
121300309 5274 Embryophyte View MSA
123338095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain