Gene : Pavir.J603800 P. virgatum v4.1
Defline:  (1 of 4) PTHR12741:SF5 - CALLOSE SYNTHASE 10 Genomic Order:  2
Name:  ? Pavir.J603800 Secondary Identifier:  ? PAC:37679088
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6773 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J603800 0.5kb upstream 0.5kb upstream 6796 true scaffold_58: 27921-34716 Panicum virgatum
Pavir.J603800 0.5kb upstream 0.5kb upstream 500 false scaffold_58: 27921-28420 Panicum virgatum
Pavir.J603800 0.5kb downstream 0.5kb downstream 6796 true scaffold_58: 28421-35216 Panicum virgatum
Pavir.J603800 0.5kb downstream 0.5kb downstream 500 false scaffold_58: 34717-35216 Panicum virgatum
Pavir.J603800 1.0kb upstream 1.0kb upstream 7296 true scaffold_58: 27421-34716 Panicum virgatum
Pavir.J603800 1.0kb upstream 1.0kb upstream 1000 false scaffold_58: 27421-28420 Panicum virgatum
Pavir.J603800 1.0kb downstream 1.0kb downstream 7296 true scaffold_58: 28421-35716 Panicum virgatum
Pavir.J603800 1.0kb downstream 1.0kb downstream 1000 false scaffold_58: 34717-35716 Panicum virgatum
Pavir.J603800 2.0kb upstream 2.0kb upstream 8296 true scaffold_58: 26421-34716 Panicum virgatum
Pavir.J603800 2.0kb upstream 2.0kb upstream 2000 false scaffold_58: 26421-28420 Panicum virgatum
Pavir.J603800 2.0kb downstream 2.0kb downstream 8296 true scaffold_58: 28421-36716 Panicum virgatum
Pavir.J603800 2.0kb downstream 2.0kb downstream 2000 false scaffold_58: 34717-36716 Panicum virgatum
Pavir.J603800 5.0kb upstream 5.0kb upstream 11296 true scaffold_58: 23421-34716 Panicum virgatum
Pavir.J603800 5.0kb upstream 5.0kb upstream 5000 false scaffold_58: 23421-28420 Panicum virgatum
Pavir.J603800 5.0kb downstream 5.0kb downstream 11296 true scaffold_58: 28421-39716 Panicum virgatum
Pavir.J603800 5.0kb downstream 5.0kb downstream 5000 false scaffold_58: 34717-39716 Panicum virgatum
Pavir.J603800 10.0kb upstream 10.0kb upstream 16296 true scaffold_58: 18421-34716 Panicum virgatum
Pavir.J603800 10.0kb upstream 10.0kb upstream 10000 false scaffold_58: 18421-28420 Panicum virgatum
Pavir.J603800 10.0kb downstream 10.0kb downstream 16296 true scaffold_58: 28421-44716 Panicum virgatum
Pavir.J603800 10.0kb downstream 10.0kb downstream 10000 false scaffold_58: 34717-44716 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198297 5267 Panicoideae View MSA
124589873 5269 Grass View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain