Gene : Pavir.J402000 P. virgatum v4.1
Defline:  (1 of 3) PTHR22904:SF312 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN Genomic Order:  3
Name:  ? Pavir.J402000 Secondary Identifier:  ? PAC:37629035
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J402000 0.5kb upstream 0.5kb upstream 2913 true scaffold_30: 35370-38282 Panicum virgatum
Pavir.J402000 0.5kb upstream 0.5kb upstream 500 false scaffold_30: 37783-38282 Panicum virgatum
Pavir.J402000 0.5kb downstream 0.5kb downstream 2913 true scaffold_30: 34870-37782 Panicum virgatum
Pavir.J402000 0.5kb downstream 0.5kb downstream 500 false scaffold_30: 34870-35369 Panicum virgatum
Pavir.J402000 1.0kb upstream 1.0kb upstream 3413 true scaffold_30: 35370-38782 Panicum virgatum
Pavir.J402000 1.0kb upstream 1.0kb upstream 1000 false scaffold_30: 37783-38782 Panicum virgatum
Pavir.J402000 1.0kb downstream 1.0kb downstream 3413 true scaffold_30: 34370-37782 Panicum virgatum
Pavir.J402000 1.0kb downstream 1.0kb downstream 1000 false scaffold_30: 34370-35369 Panicum virgatum
Pavir.J402000 2.0kb upstream 2.0kb upstream 4413 true scaffold_30: 35370-39782 Panicum virgatum
Pavir.J402000 2.0kb upstream 2.0kb upstream 2000 false scaffold_30: 37783-39782 Panicum virgatum
Pavir.J402000 2.0kb downstream 2.0kb downstream 4413 true scaffold_30: 33370-37782 Panicum virgatum
Pavir.J402000 2.0kb downstream 2.0kb downstream 2000 false scaffold_30: 33370-35369 Panicum virgatum
Pavir.J402000 5.0kb upstream 5.0kb upstream 7413 true scaffold_30: 35370-42782 Panicum virgatum
Pavir.J402000 5.0kb upstream 5.0kb upstream 5000 false scaffold_30: 37783-42782 Panicum virgatum
Pavir.J402000 5.0kb downstream 5.0kb downstream 7413 true scaffold_30: 30370-37782 Panicum virgatum
Pavir.J402000 5.0kb downstream 5.0kb downstream 5000 false scaffold_30: 30370-35369 Panicum virgatum
Pavir.J402000 10.0kb upstream 10.0kb upstream 12413 true scaffold_30: 35370-47782 Panicum virgatum
Pavir.J402000 10.0kb upstream 10.0kb upstream 10000 false scaffold_30: 37783-47782 Panicum virgatum
Pavir.J402000 10.0kb downstream 10.0kb downstream 12413 true scaffold_30: 25370-37782 Panicum virgatum
Pavir.J402000 10.0kb downstream 10.0kb downstream 10000 false scaffold_30: 25370-35369 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184498 5267 Panicoideae View MSA
124570894 5269 Grass View MSA
122046706 5273 Angiosperm View MSA
121343893 5274 Embryophyte View MSA
123425417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain