Gene : Pavir.J031100 P. virgatum v4.1
Defline:  (1 of 1) K09761 - 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] (rsmE) Genomic Order:  5
Name:  ? Pavir.J031100 Secondary Identifier:  ? PAC:37679025
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J031100 0.5kb upstream 0.5kb upstream 5604 true scaffold_109: 31109-36712 Panicum virgatum
Pavir.J031100 0.5kb upstream 0.5kb upstream 500 false scaffold_109: 31109-31608 Panicum virgatum
Pavir.J031100 0.5kb downstream 0.5kb downstream 5604 true scaffold_109: 31609-37212 Panicum virgatum
Pavir.J031100 0.5kb downstream 0.5kb downstream 500 false scaffold_109: 36713-37212 Panicum virgatum
Pavir.J031100 1.0kb upstream 1.0kb upstream 6104 true scaffold_109: 30609-36712 Panicum virgatum
Pavir.J031100 1.0kb upstream 1.0kb upstream 1000 false scaffold_109: 30609-31608 Panicum virgatum
Pavir.J031100 1.0kb downstream 1.0kb downstream 6104 true scaffold_109: 31609-37712 Panicum virgatum
Pavir.J031100 1.0kb downstream 1.0kb downstream 1000 false scaffold_109: 36713-37712 Panicum virgatum
Pavir.J031100 2.0kb upstream 2.0kb upstream 7104 true scaffold_109: 29609-36712 Panicum virgatum
Pavir.J031100 2.0kb upstream 2.0kb upstream 2000 false scaffold_109: 29609-31608 Panicum virgatum
Pavir.J031100 2.0kb downstream 2.0kb downstream 7104 true scaffold_109: 31609-38712 Panicum virgatum
Pavir.J031100 2.0kb downstream 2.0kb downstream 2000 false scaffold_109: 36713-38712 Panicum virgatum
Pavir.J031100 5.0kb upstream 5.0kb upstream 10104 true scaffold_109: 26609-36712 Panicum virgatum
Pavir.J031100 5.0kb upstream 5.0kb upstream 5000 false scaffold_109: 26609-31608 Panicum virgatum
Pavir.J031100 5.0kb downstream 5.0kb downstream 10104 true scaffold_109: 31609-41712 Panicum virgatum
Pavir.J031100 5.0kb downstream 5.0kb downstream 5000 false scaffold_109: 36713-41712 Panicum virgatum
Pavir.J031100 10.0kb upstream 10.0kb upstream 15104 true scaffold_109: 21609-36712 Panicum virgatum
Pavir.J031100 10.0kb upstream 10.0kb upstream 10000 false scaffold_109: 21609-31608 Panicum virgatum
Pavir.J031100 10.0kb downstream 10.0kb downstream 15104 true scaffold_109: 31609-46712 Panicum virgatum
Pavir.J031100 10.0kb downstream 10.0kb downstream 10000 false scaffold_109: 36713-46712 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177056 5267 Panicoideae View MSA
124572813 5269 Grass View MSA
122046212 5273 Angiosperm View MSA
121345498 5274 Embryophyte View MSA
123427980 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain