Gene : Pavir.J651600 P. virgatum v4.1
Defline:  (1 of 7) 5.3.1.8 - Mannose-6-phosphate isomerase / Phosphomannose isomerase Genomic Order:  1
Name:  ? Pavir.J651600 Secondary Identifier:  ? PAC:37616870
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum MANNCAT-PWY Panicum virgatum pathologic  
Pvirgatum PWY-3881 Panicum virgatum pathologic  
Pvirgatum PWY-5659 Panicum virgatum pathologic  
Pvirgatum PWY-882 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J651600 0.5kb upstream 0.5kb upstream 3580 true scaffold_6632: 1194-4773 Panicum virgatum
Pavir.J651600 0.5kb upstream 0.5kb upstream 500 false scaffold_6632: 1194-1693 Panicum virgatum
Pavir.J651600 0.5kb downstream 0.5kb downstream 3580 true scaffold_6632: 1694-5273 Panicum virgatum
Pavir.J651600 0.5kb downstream 0.5kb downstream 500 false scaffold_6632: 4774-5273 Panicum virgatum
Pavir.J651600 1.0kb upstream 1.0kb upstream 4080 true scaffold_6632: 694-4773 Panicum virgatum
Pavir.J651600 1.0kb upstream 1.0kb upstream 1000 false scaffold_6632: 694-1693 Panicum virgatum
Pavir.J651600 1.0kb downstream 1.0kb downstream 4080 true scaffold_6632: 1694-5773 Panicum virgatum
Pavir.J651600 1.0kb downstream 1.0kb downstream 1000 false scaffold_6632: 4774-5773 Panicum virgatum
Pavir.J651600 2.0kb upstream 2.0kb upstream 4773 true scaffold_6632: 1-4773 Panicum virgatum
Pavir.J651600 2.0kb upstream 2.0kb upstream 1693 false scaffold_6632: 1-1693 Panicum virgatum
Pavir.J651600 2.0kb downstream 2.0kb downstream 5080 true scaffold_6632: 1694-6773 Panicum virgatum
Pavir.J651600 2.0kb downstream 2.0kb downstream 2000 false scaffold_6632: 4774-6773 Panicum virgatum
Pavir.J651600 5.0kb upstream 5.0kb upstream 4773 true scaffold_6632: 1-4773 Panicum virgatum
Pavir.J651600 5.0kb upstream 5.0kb upstream 1693 false scaffold_6632: 1-1693 Panicum virgatum
Pavir.J651600 5.0kb downstream 5.0kb downstream 7094 true scaffold_6632: 1694-8787 Panicum virgatum
Pavir.J651600 5.0kb downstream 5.0kb downstream 4014 false scaffold_6632: 4774-8787 Panicum virgatum
Pavir.J651600 10.0kb upstream 10.0kb upstream 4773 true scaffold_6632: 1-4773 Panicum virgatum
Pavir.J651600 10.0kb upstream 10.0kb upstream 1693 false scaffold_6632: 1-1693 Panicum virgatum
Pavir.J651600 10.0kb downstream 10.0kb downstream 7094 true scaffold_6632: 1694-8787 Panicum virgatum
Pavir.J651600 10.0kb downstream 10.0kb downstream 4014 false scaffold_6632: 4774-8787 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030931 5273 Angiosperm View MSA
122090210 5267 Panicoideae Singleton cluster - no MSA
124387796 5269 Grass Singleton cluster - no MSA
121300045 5274 Embryophyte View MSA
123337857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain