Gene : Thecc1EG026625 T. cacao v1.1

Defline:  (1 of 1) K06634 - cyclin H (CCNH) Genomic Order:  3077
Name:  ? Thecc1EG026625 Secondary Identifier:  ? PAC:27421067

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026625 0.5kb upstream 0.5kb upstream 10961 true scaffold_5: 39323546-39334506 Theobroma cacao
Thecc1EG026625 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 39323546-39324045 Theobroma cacao
Thecc1EG026625 0.5kb downstream 0.5kb downstream 10961 true scaffold_5: 39324046-39335006 Theobroma cacao
Thecc1EG026625 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 39334507-39335006 Theobroma cacao
Thecc1EG026625 1.0kb upstream 1.0kb upstream 11461 true scaffold_5: 39323046-39334506 Theobroma cacao
Thecc1EG026625 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 39323046-39324045 Theobroma cacao
Thecc1EG026625 1.0kb downstream 1.0kb downstream 11461 true scaffold_5: 39324046-39335506 Theobroma cacao
Thecc1EG026625 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 39334507-39335506 Theobroma cacao
Thecc1EG026625 2.0kb upstream 2.0kb upstream 12461 true scaffold_5: 39322046-39334506 Theobroma cacao
Thecc1EG026625 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 39322046-39324045 Theobroma cacao
Thecc1EG026625 2.0kb downstream 2.0kb downstream 12461 true scaffold_5: 39324046-39336506 Theobroma cacao
Thecc1EG026625 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 39334507-39336506 Theobroma cacao
Thecc1EG026625 5.0kb upstream 5.0kb upstream 15461 true scaffold_5: 39319046-39334506 Theobroma cacao
Thecc1EG026625 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 39319046-39324045 Theobroma cacao
Thecc1EG026625 5.0kb downstream 5.0kb downstream 15461 true scaffold_5: 39324046-39339506 Theobroma cacao
Thecc1EG026625 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 39334507-39339506 Theobroma cacao
Thecc1EG026625 10.0kb upstream 10.0kb upstream 20461 true scaffold_5: 39314046-39334506 Theobroma cacao
Thecc1EG026625 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 39314046-39324045 Theobroma cacao
Thecc1EG026625 10.0kb downstream 10.0kb downstream 20461 true scaffold_5: 39324046-39344506 Theobroma cacao
Thecc1EG026625 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 39334507-39344506 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832898 5264 Brassicales-Malvales View MSA
124336912 5266 SBM View MSA
124240841 5268 Malvidae View MSA
124064270 5270 Rosid View MSA
123739279 5271 Pentapetalae View MSA
122793594 5272 Eudicot View MSA
122044761 5273 Angiosperm View MSA
121344916 5274 Embryophyte View MSA
123425113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain