Gene : Pavir.8KG010300 P. virgatum v4.1
Defline:  (1 of 8) 1.1.1.3 - Homoserine dehydrogenase Genomic Order:  98
Name:  ? Pavir.8KG010300 Secondary Identifier:  ? PAC:37597510
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum HOMOSERSYN-PWY Panicum virgatum pathologic  
Pvirgatum PWY-3001 Panicum virgatum pathologic  
Pvirgatum PWY-724 Panicum virgatum pathologic  
Pvirgatum THRESYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.8KG010300 0.5kb upstream 0.5kb upstream 5548 true Chr08K: 1064479-1070026 Panicum virgatum
Pavir.8KG010300 0.5kb upstream 0.5kb upstream 500 false Chr08K: 1064479-1064978 Panicum virgatum
Pavir.8KG010300 0.5kb downstream 0.5kb downstream 5548 true Chr08K: 1064979-1070526 Panicum virgatum
Pavir.8KG010300 0.5kb downstream 0.5kb downstream 500 false Chr08K: 1070027-1070526 Panicum virgatum
Pavir.8KG010300 1.0kb upstream 1.0kb upstream 6048 true Chr08K: 1063979-1070026 Panicum virgatum
Pavir.8KG010300 1.0kb upstream 1.0kb upstream 1000 false Chr08K: 1063979-1064978 Panicum virgatum
Pavir.8KG010300 1.0kb downstream 1.0kb downstream 6048 true Chr08K: 1064979-1071026 Panicum virgatum
Pavir.8KG010300 1.0kb downstream 1.0kb downstream 1000 false Chr08K: 1070027-1071026 Panicum virgatum
Pavir.8KG010300 2.0kb upstream 2.0kb upstream 7048 true Chr08K: 1062979-1070026 Panicum virgatum
Pavir.8KG010300 2.0kb upstream 2.0kb upstream 2000 false Chr08K: 1062979-1064978 Panicum virgatum
Pavir.8KG010300 2.0kb downstream 2.0kb downstream 7048 true Chr08K: 1064979-1072026 Panicum virgatum
Pavir.8KG010300 2.0kb downstream 2.0kb downstream 2000 false Chr08K: 1070027-1072026 Panicum virgatum
Pavir.8KG010300 5.0kb upstream 5.0kb upstream 10048 true Chr08K: 1059979-1070026 Panicum virgatum
Pavir.8KG010300 5.0kb upstream 5.0kb upstream 5000 false Chr08K: 1059979-1064978 Panicum virgatum
Pavir.8KG010300 5.0kb downstream 5.0kb downstream 10048 true Chr08K: 1064979-1075026 Panicum virgatum
Pavir.8KG010300 5.0kb downstream 5.0kb downstream 5000 false Chr08K: 1070027-1075026 Panicum virgatum
Pavir.8KG010300 10.0kb upstream 10.0kb upstream 15048 true Chr08K: 1054979-1070026 Panicum virgatum
Pavir.8KG010300 10.0kb upstream 10.0kb upstream 10000 false Chr08K: 1054979-1064978 Panicum virgatum
Pavir.8KG010300 10.0kb downstream 10.0kb downstream 15048 true Chr08K: 1064979-1080026 Panicum virgatum
Pavir.8KG010300 10.0kb downstream 10.0kb downstream 10000 false Chr08K: 1070027-1080026 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188388 5267 Panicoideae View MSA
124571730 5269 Grass View MSA
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain