Gene : Thecc1EG026585 T. cacao v1.1
Defline:  (1 of 4) K08066 - nuclear transcription factor Y, gamma (NFYC) Genomic Order:  3039
Name:  ? Thecc1EG026585 Secondary Identifier:  ? PAC:27424560
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026585 0.5kb upstream 0.5kb upstream 2798 true scaffold_5: 39145801-39148598 Theobroma cacao
Thecc1EG026585 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 39148099-39148598 Theobroma cacao
Thecc1EG026585 0.5kb downstream 0.5kb downstream 2798 true scaffold_5: 39145301-39148098 Theobroma cacao
Thecc1EG026585 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 39145301-39145800 Theobroma cacao
Thecc1EG026585 1.0kb upstream 1.0kb upstream 3298 true scaffold_5: 39145801-39149098 Theobroma cacao
Thecc1EG026585 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 39148099-39149098 Theobroma cacao
Thecc1EG026585 1.0kb downstream 1.0kb downstream 3298 true scaffold_5: 39144801-39148098 Theobroma cacao
Thecc1EG026585 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 39144801-39145800 Theobroma cacao
Thecc1EG026585 2.0kb upstream 2.0kb upstream 4298 true scaffold_5: 39145801-39150098 Theobroma cacao
Thecc1EG026585 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 39148099-39150098 Theobroma cacao
Thecc1EG026585 2.0kb downstream 2.0kb downstream 4298 true scaffold_5: 39143801-39148098 Theobroma cacao
Thecc1EG026585 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 39143801-39145800 Theobroma cacao
Thecc1EG026585 5.0kb upstream 5.0kb upstream 7298 true scaffold_5: 39145801-39153098 Theobroma cacao
Thecc1EG026585 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 39148099-39153098 Theobroma cacao
Thecc1EG026585 5.0kb downstream 5.0kb downstream 7298 true scaffold_5: 39140801-39148098 Theobroma cacao
Thecc1EG026585 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 39140801-39145800 Theobroma cacao
Thecc1EG026585 10.0kb upstream 10.0kb upstream 12298 true scaffold_5: 39145801-39158098 Theobroma cacao
Thecc1EG026585 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 39148099-39158098 Theobroma cacao
Thecc1EG026585 10.0kb downstream 10.0kb downstream 12298 true scaffold_5: 39135801-39148098 Theobroma cacao
Thecc1EG026585 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 39135801-39145800 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838464 5264 Brassicales-Malvales View MSA
124342477 5266 SBM View MSA
124251136 5268 Malvidae View MSA
124071144 5270 Rosid View MSA
123743416 5271 Pentapetalae View MSA
122794744 5272 Eudicot View MSA
122049278 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain