Gene : Thecc1EG026582 T. cacao v1.1

Defline:  (1 of 5) PTHR34661//PTHR34661:SF3 - FAMILY NOT NAMED // ALPHA-CRYSTALLIN DOMAIN OF HEAT SHOCK PROTEIN-CONTAINING PROTEIN Genomic Order:  3036
Name:  ? Thecc1EG026582 Secondary Identifier:  ? PAC:27423106

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026582 0.5kb upstream 0.5kb upstream 10768 true scaffold_5: 39131634-39142401 Theobroma cacao
Thecc1EG026582 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 39141902-39142401 Theobroma cacao
Thecc1EG026582 0.5kb downstream 0.5kb downstream 10768 true scaffold_5: 39131134-39141901 Theobroma cacao
Thecc1EG026582 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 39131134-39131633 Theobroma cacao
Thecc1EG026582 1.0kb upstream 1.0kb upstream 11268 true scaffold_5: 39131634-39142901 Theobroma cacao
Thecc1EG026582 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 39141902-39142901 Theobroma cacao
Thecc1EG026582 1.0kb downstream 1.0kb downstream 11268 true scaffold_5: 39130634-39141901 Theobroma cacao
Thecc1EG026582 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 39130634-39131633 Theobroma cacao
Thecc1EG026582 2.0kb upstream 2.0kb upstream 12268 true scaffold_5: 39131634-39143901 Theobroma cacao
Thecc1EG026582 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 39141902-39143901 Theobroma cacao
Thecc1EG026582 2.0kb downstream 2.0kb downstream 12268 true scaffold_5: 39129634-39141901 Theobroma cacao
Thecc1EG026582 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 39129634-39131633 Theobroma cacao
Thecc1EG026582 5.0kb upstream 5.0kb upstream 15268 true scaffold_5: 39131634-39146901 Theobroma cacao
Thecc1EG026582 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 39141902-39146901 Theobroma cacao
Thecc1EG026582 5.0kb downstream 5.0kb downstream 15268 true scaffold_5: 39126634-39141901 Theobroma cacao
Thecc1EG026582 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 39126634-39131633 Theobroma cacao
Thecc1EG026582 10.0kb upstream 10.0kb upstream 20268 true scaffold_5: 39131634-39151901 Theobroma cacao
Thecc1EG026582 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 39141902-39151901 Theobroma cacao
Thecc1EG026582 10.0kb downstream 10.0kb downstream 20268 true scaffold_5: 39121634-39141901 Theobroma cacao
Thecc1EG026582 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 39121634-39131633 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830039 5264 Brassicales-Malvales View MSA
124344625 5266 SBM View MSA
124244666 5268 Malvidae View MSA
124065098 5270 Rosid View MSA
123751174 5271 Pentapetalae View MSA
122794254 5272 Eudicot View MSA
122044851 5273 Angiosperm View MSA
121347448 5274 Embryophyte View MSA
123380555 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain