Gene : Thecc1EG026574 T. cacao v1.1
Defline:  (1 of 1) 2.7.1.36 - Mevalonate kinase Genomic Order:  3029
Name:  ? Thecc1EG026574 Secondary Identifier:  ? PAC:27425157
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5910 Theobroma cacao pathologic  
Tcacao PWY-922 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026574 0.5kb upstream 0.5kb upstream 8504 true scaffold_5: 39099283-39107786 Theobroma cacao
Thecc1EG026574 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 39107287-39107786 Theobroma cacao
Thecc1EG026574 0.5kb downstream 0.5kb downstream 8504 true scaffold_5: 39098783-39107286 Theobroma cacao
Thecc1EG026574 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 39098783-39099282 Theobroma cacao
Thecc1EG026574 1.0kb upstream 1.0kb upstream 9004 true scaffold_5: 39099283-39108286 Theobroma cacao
Thecc1EG026574 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 39107287-39108286 Theobroma cacao
Thecc1EG026574 1.0kb downstream 1.0kb downstream 9004 true scaffold_5: 39098283-39107286 Theobroma cacao
Thecc1EG026574 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 39098283-39099282 Theobroma cacao
Thecc1EG026574 2.0kb upstream 2.0kb upstream 10004 true scaffold_5: 39099283-39109286 Theobroma cacao
Thecc1EG026574 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 39107287-39109286 Theobroma cacao
Thecc1EG026574 2.0kb downstream 2.0kb downstream 10004 true scaffold_5: 39097283-39107286 Theobroma cacao
Thecc1EG026574 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 39097283-39099282 Theobroma cacao
Thecc1EG026574 5.0kb upstream 5.0kb upstream 13004 true scaffold_5: 39099283-39112286 Theobroma cacao
Thecc1EG026574 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 39107287-39112286 Theobroma cacao
Thecc1EG026574 5.0kb downstream 5.0kb downstream 13004 true scaffold_5: 39094283-39107286 Theobroma cacao
Thecc1EG026574 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 39094283-39099282 Theobroma cacao
Thecc1EG026574 10.0kb upstream 10.0kb upstream 18004 true scaffold_5: 39099283-39117286 Theobroma cacao
Thecc1EG026574 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 39107287-39117286 Theobroma cacao
Thecc1EG026574 10.0kb downstream 10.0kb downstream 18004 true scaffold_5: 39089283-39107286 Theobroma cacao
Thecc1EG026574 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 39089283-39099282 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041242 5273 Angiosperm View MSA
123840116 5264 Brassicales-Malvales View MSA
124346036 5266 SBM View MSA
124238701 5268 Malvidae View MSA
124063522 5270 Rosid View MSA
123737750 5271 Pentapetalae View MSA
122787384 5272 Eudicot View MSA
121345229 5274 Embryophyte View MSA
123380177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain