Gene : Pavir.8KG175500 P. virgatum v4.1
Defline:  (1 of 2) 2.1.1.205 - tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase Genomic Order:  1582
Name:  ? Pavir.8KG175500 Secondary Identifier:  ? PAC:37601734
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6829 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.8KG175500 0.5kb upstream 0.5kb upstream 3146 true Chr08K: 30162915-30166060 Panicum virgatum
Pavir.8KG175500 0.5kb upstream 0.5kb upstream 500 false Chr08K: 30165561-30166060 Panicum virgatum
Pavir.8KG175500 0.5kb downstream 0.5kb downstream 3146 true Chr08K: 30162415-30165560 Panicum virgatum
Pavir.8KG175500 0.5kb downstream 0.5kb downstream 500 false Chr08K: 30162415-30162914 Panicum virgatum
Pavir.8KG175500 1.0kb upstream 1.0kb upstream 3646 true Chr08K: 30162915-30166560 Panicum virgatum
Pavir.8KG175500 1.0kb upstream 1.0kb upstream 1000 false Chr08K: 30165561-30166560 Panicum virgatum
Pavir.8KG175500 1.0kb downstream 1.0kb downstream 3646 true Chr08K: 30161915-30165560 Panicum virgatum
Pavir.8KG175500 1.0kb downstream 1.0kb downstream 1000 false Chr08K: 30161915-30162914 Panicum virgatum
Pavir.8KG175500 2.0kb upstream 2.0kb upstream 4646 true Chr08K: 30162915-30167560 Panicum virgatum
Pavir.8KG175500 2.0kb upstream 2.0kb upstream 2000 false Chr08K: 30165561-30167560 Panicum virgatum
Pavir.8KG175500 2.0kb downstream 2.0kb downstream 4646 true Chr08K: 30160915-30165560 Panicum virgatum
Pavir.8KG175500 2.0kb downstream 2.0kb downstream 2000 false Chr08K: 30160915-30162914 Panicum virgatum
Pavir.8KG175500 5.0kb upstream 5.0kb upstream 7646 true Chr08K: 30162915-30170560 Panicum virgatum
Pavir.8KG175500 5.0kb upstream 5.0kb upstream 5000 false Chr08K: 30165561-30170560 Panicum virgatum
Pavir.8KG175500 5.0kb downstream 5.0kb downstream 7646 true Chr08K: 30157915-30165560 Panicum virgatum
Pavir.8KG175500 5.0kb downstream 5.0kb downstream 5000 false Chr08K: 30157915-30162914 Panicum virgatum
Pavir.8KG175500 10.0kb upstream 10.0kb upstream 12646 true Chr08K: 30162915-30175560 Panicum virgatum
Pavir.8KG175500 10.0kb upstream 10.0kb upstream 10000 false Chr08K: 30165561-30175560 Panicum virgatum
Pavir.8KG175500 10.0kb downstream 10.0kb downstream 12646 true Chr08K: 30152915-30165560 Panicum virgatum
Pavir.8KG175500 10.0kb downstream 10.0kb downstream 10000 false Chr08K: 30152915-30162914 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184350 5267 Panicoideae View MSA
124575975 5269 Grass View MSA
122044785 5273 Angiosperm View MSA
121347520 5274 Embryophyte View MSA
123424894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain