Gene : Pavir.8KG157200 P. virgatum v4.1
Defline:  (1 of 2) 5.3.1.23 - S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase Genomic Order:  1414
Name:  ? Pavir.8KG157200 Secondary Identifier:  ? PAC:37600404
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-4361 Panicum virgatum pathologic  
Pvirgatum PWY-7270 Panicum virgatum pathologic  
Pvirgatum PWY-7528 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.8KG157200 0.5kb upstream 0.5kb upstream 4184 true Chr08K: 26554586-26558769 Panicum virgatum
Pavir.8KG157200 0.5kb upstream 0.5kb upstream 500 false Chr08K: 26558270-26558769 Panicum virgatum
Pavir.8KG157200 0.5kb downstream 0.5kb downstream 4184 true Chr08K: 26554086-26558269 Panicum virgatum
Pavir.8KG157200 0.5kb downstream 0.5kb downstream 500 false Chr08K: 26554086-26554585 Panicum virgatum
Pavir.8KG157200 1.0kb upstream 1.0kb upstream 4684 true Chr08K: 26554586-26559269 Panicum virgatum
Pavir.8KG157200 1.0kb upstream 1.0kb upstream 1000 false Chr08K: 26558270-26559269 Panicum virgatum
Pavir.8KG157200 1.0kb downstream 1.0kb downstream 4684 true Chr08K: 26553586-26558269 Panicum virgatum
Pavir.8KG157200 1.0kb downstream 1.0kb downstream 1000 false Chr08K: 26553586-26554585 Panicum virgatum
Pavir.8KG157200 2.0kb upstream 2.0kb upstream 5684 true Chr08K: 26554586-26560269 Panicum virgatum
Pavir.8KG157200 2.0kb upstream 2.0kb upstream 2000 false Chr08K: 26558270-26560269 Panicum virgatum
Pavir.8KG157200 2.0kb downstream 2.0kb downstream 5684 true Chr08K: 26552586-26558269 Panicum virgatum
Pavir.8KG157200 2.0kb downstream 2.0kb downstream 2000 false Chr08K: 26552586-26554585 Panicum virgatum
Pavir.8KG157200 5.0kb upstream 5.0kb upstream 8684 true Chr08K: 26554586-26563269 Panicum virgatum
Pavir.8KG157200 5.0kb upstream 5.0kb upstream 5000 false Chr08K: 26558270-26563269 Panicum virgatum
Pavir.8KG157200 5.0kb downstream 5.0kb downstream 8684 true Chr08K: 26549586-26558269 Panicum virgatum
Pavir.8KG157200 5.0kb downstream 5.0kb downstream 5000 false Chr08K: 26549586-26554585 Panicum virgatum
Pavir.8KG157200 10.0kb upstream 10.0kb upstream 13684 true Chr08K: 26554586-26568269 Panicum virgatum
Pavir.8KG157200 10.0kb upstream 10.0kb upstream 10000 false Chr08K: 26558270-26568269 Panicum virgatum
Pavir.8KG157200 10.0kb downstream 10.0kb downstream 13684 true Chr08K: 26544586-26558269 Panicum virgatum
Pavir.8KG157200 10.0kb downstream 10.0kb downstream 10000 false Chr08K: 26544586-26554585 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189674 5267 Panicoideae View MSA
124569280 5269 Grass View MSA
122043863 5273 Angiosperm View MSA
121310201 5274 Embryophyte View MSA
123428305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain