Gene : Thecc1EG026549 T. cacao v1.1
Defline:  (1 of 1) PTHR10992//PTHR10992:SF773 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // PROTEIN AUXIN RESPONSE 4 Genomic Order:  3004
Name:  ? Thecc1EG026549 Secondary Identifier:  ? PAC:27422210
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026549 0.5kb upstream 0.5kb upstream 3348 true scaffold_5: 38980849-38984196 Theobroma cacao
Thecc1EG026549 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38983697-38984196 Theobroma cacao
Thecc1EG026549 0.5kb downstream 0.5kb downstream 3348 true scaffold_5: 38980349-38983696 Theobroma cacao
Thecc1EG026549 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38980349-38980848 Theobroma cacao
Thecc1EG026549 1.0kb upstream 1.0kb upstream 3848 true scaffold_5: 38980849-38984696 Theobroma cacao
Thecc1EG026549 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38983697-38984696 Theobroma cacao
Thecc1EG026549 1.0kb downstream 1.0kb downstream 3848 true scaffold_5: 38979849-38983696 Theobroma cacao
Thecc1EG026549 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38979849-38980848 Theobroma cacao
Thecc1EG026549 2.0kb upstream 2.0kb upstream 4848 true scaffold_5: 38980849-38985696 Theobroma cacao
Thecc1EG026549 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38983697-38985696 Theobroma cacao
Thecc1EG026549 2.0kb downstream 2.0kb downstream 4848 true scaffold_5: 38978849-38983696 Theobroma cacao
Thecc1EG026549 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38978849-38980848 Theobroma cacao
Thecc1EG026549 5.0kb upstream 5.0kb upstream 7848 true scaffold_5: 38980849-38988696 Theobroma cacao
Thecc1EG026549 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38983697-38988696 Theobroma cacao
Thecc1EG026549 5.0kb downstream 5.0kb downstream 7848 true scaffold_5: 38975849-38983696 Theobroma cacao
Thecc1EG026549 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38975849-38980848 Theobroma cacao
Thecc1EG026549 10.0kb upstream 10.0kb upstream 12848 true scaffold_5: 38980849-38993696 Theobroma cacao
Thecc1EG026549 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38983697-38993696 Theobroma cacao
Thecc1EG026549 10.0kb downstream 10.0kb downstream 12848 true scaffold_5: 38970849-38983696 Theobroma cacao
Thecc1EG026549 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38970849-38980848 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834239 5264 Brassicales-Malvales View MSA
124341692 5266 SBM View MSA
124240695 5268 Malvidae View MSA
124064720 5270 Rosid View MSA
123737240 5271 Pentapetalae View MSA
122791841 5272 Eudicot View MSA
122047835 5273 Angiosperm View MSA
121347873 5274 Embryophyte View MSA
123380660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain