Gene : Thecc1EG026537 T. cacao v1.1

Defline:  (1 of 1) K02350 - DNA polymerase zeta (POLZ1, rev3) Genomic Order:  2994
Name:  ? Thecc1EG026537 Secondary Identifier:  ? PAC:27421163

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026537 0.5kb upstream 0.5kb upstream 13114 true scaffold_5: 38892249-38905362 Theobroma cacao
Thecc1EG026537 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38904863-38905362 Theobroma cacao
Thecc1EG026537 0.5kb downstream 0.5kb downstream 13114 true scaffold_5: 38891749-38904862 Theobroma cacao
Thecc1EG026537 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38891749-38892248 Theobroma cacao
Thecc1EG026537 1.0kb upstream 1.0kb upstream 13614 true scaffold_5: 38892249-38905862 Theobroma cacao
Thecc1EG026537 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38904863-38905862 Theobroma cacao
Thecc1EG026537 1.0kb downstream 1.0kb downstream 13614 true scaffold_5: 38891249-38904862 Theobroma cacao
Thecc1EG026537 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38891249-38892248 Theobroma cacao
Thecc1EG026537 2.0kb upstream 2.0kb upstream 14614 true scaffold_5: 38892249-38906862 Theobroma cacao
Thecc1EG026537 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38904863-38906862 Theobroma cacao
Thecc1EG026537 2.0kb downstream 2.0kb downstream 14614 true scaffold_5: 38890249-38904862 Theobroma cacao
Thecc1EG026537 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38890249-38892248 Theobroma cacao
Thecc1EG026537 5.0kb upstream 5.0kb upstream 17614 true scaffold_5: 38892249-38909862 Theobroma cacao
Thecc1EG026537 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38904863-38909862 Theobroma cacao
Thecc1EG026537 5.0kb downstream 5.0kb downstream 17614 true scaffold_5: 38887249-38904862 Theobroma cacao
Thecc1EG026537 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38887249-38892248 Theobroma cacao
Thecc1EG026537 10.0kb upstream 10.0kb upstream 22614 true scaffold_5: 38892249-38914862 Theobroma cacao
Thecc1EG026537 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38904863-38914862 Theobroma cacao
Thecc1EG026537 10.0kb downstream 10.0kb downstream 22614 true scaffold_5: 38882249-38904862 Theobroma cacao
Thecc1EG026537 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38882249-38892248 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830869 5264 Brassicales-Malvales View MSA
124339316 5266 SBM View MSA
124239936 5268 Malvidae View MSA
124050212 5270 Rosid View MSA
123737448 5271 Pentapetalae View MSA
122788855 5272 Eudicot View MSA
122045445 5273 Angiosperm View MSA
121348298 5274 Embryophyte View MSA
123425698 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain