Gene : Pavir.8KG218900 P. virgatum v4.1
Defline:  (1 of 6) PTHR13301//PTHR13301:SF73 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1973
Name:  ? Pavir.8KG218900 Secondary Identifier:  ? PAC:37601743
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-1001 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.8KG218900 0.5kb upstream 0.5kb upstream 6256 true Chr08K: 42577098-42583353 Panicum virgatum
Pavir.8KG218900 0.5kb upstream 0.5kb upstream 500 false Chr08K: 42582854-42583353 Panicum virgatum
Pavir.8KG218900 0.5kb downstream 0.5kb downstream 6256 true Chr08K: 42576598-42582853 Panicum virgatum
Pavir.8KG218900 0.5kb downstream 0.5kb downstream 500 false Chr08K: 42576598-42577097 Panicum virgatum
Pavir.8KG218900 1.0kb upstream 1.0kb upstream 6756 true Chr08K: 42577098-42583853 Panicum virgatum
Pavir.8KG218900 1.0kb upstream 1.0kb upstream 1000 false Chr08K: 42582854-42583853 Panicum virgatum
Pavir.8KG218900 1.0kb downstream 1.0kb downstream 6756 true Chr08K: 42576098-42582853 Panicum virgatum
Pavir.8KG218900 1.0kb downstream 1.0kb downstream 1000 false Chr08K: 42576098-42577097 Panicum virgatum
Pavir.8KG218900 2.0kb upstream 2.0kb upstream 7756 true Chr08K: 42577098-42584853 Panicum virgatum
Pavir.8KG218900 2.0kb upstream 2.0kb upstream 2000 false Chr08K: 42582854-42584853 Panicum virgatum
Pavir.8KG218900 2.0kb downstream 2.0kb downstream 7756 true Chr08K: 42575098-42582853 Panicum virgatum
Pavir.8KG218900 2.0kb downstream 2.0kb downstream 2000 false Chr08K: 42575098-42577097 Panicum virgatum
Pavir.8KG218900 5.0kb upstream 5.0kb upstream 10756 true Chr08K: 42577098-42587853 Panicum virgatum
Pavir.8KG218900 5.0kb upstream 5.0kb upstream 5000 false Chr08K: 42582854-42587853 Panicum virgatum
Pavir.8KG218900 5.0kb downstream 5.0kb downstream 10756 true Chr08K: 42572098-42582853 Panicum virgatum
Pavir.8KG218900 5.0kb downstream 5.0kb downstream 5000 false Chr08K: 42572098-42577097 Panicum virgatum
Pavir.8KG218900 10.0kb upstream 10.0kb upstream 15756 true Chr08K: 42577098-42592853 Panicum virgatum
Pavir.8KG218900 10.0kb upstream 10.0kb upstream 10000 false Chr08K: 42582854-42592853 Panicum virgatum
Pavir.8KG218900 10.0kb downstream 10.0kb downstream 15756 true Chr08K: 42567098-42582853 Panicum virgatum
Pavir.8KG218900 10.0kb downstream 10.0kb downstream 10000 false Chr08K: 42567098-42577097 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177739 5267 Panicoideae View MSA
124582866 5269 Grass View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain