Gene : Thecc1EG026543 T. cacao v1.1
Defline:  (1 of 7) K15718 - linoleate 9S-lipoxygenase (LOX1_5) Genomic Order:  2998
Name:  ? Thecc1EG026543 Secondary Identifier:  ? PAC:27421201
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026543 0.5kb upstream 0.5kb upstream 8354 true scaffold_5: 38935943-38944296 Theobroma cacao
Thecc1EG026543 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38943797-38944296 Theobroma cacao
Thecc1EG026543 0.5kb downstream 0.5kb downstream 8354 true scaffold_5: 38935443-38943796 Theobroma cacao
Thecc1EG026543 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38935443-38935942 Theobroma cacao
Thecc1EG026543 1.0kb upstream 1.0kb upstream 8854 true scaffold_5: 38935943-38944796 Theobroma cacao
Thecc1EG026543 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38943797-38944796 Theobroma cacao
Thecc1EG026543 1.0kb downstream 1.0kb downstream 8854 true scaffold_5: 38934943-38943796 Theobroma cacao
Thecc1EG026543 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38934943-38935942 Theobroma cacao
Thecc1EG026543 2.0kb upstream 2.0kb upstream 9854 true scaffold_5: 38935943-38945796 Theobroma cacao
Thecc1EG026543 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38943797-38945796 Theobroma cacao
Thecc1EG026543 2.0kb downstream 2.0kb downstream 9854 true scaffold_5: 38933943-38943796 Theobroma cacao
Thecc1EG026543 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38933943-38935942 Theobroma cacao
Thecc1EG026543 5.0kb upstream 5.0kb upstream 12854 true scaffold_5: 38935943-38948796 Theobroma cacao
Thecc1EG026543 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38943797-38948796 Theobroma cacao
Thecc1EG026543 5.0kb downstream 5.0kb downstream 12854 true scaffold_5: 38930943-38943796 Theobroma cacao
Thecc1EG026543 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38930943-38935942 Theobroma cacao
Thecc1EG026543 10.0kb upstream 10.0kb upstream 17854 true scaffold_5: 38935943-38953796 Theobroma cacao
Thecc1EG026543 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38943797-38953796 Theobroma cacao
Thecc1EG026543 10.0kb downstream 10.0kb downstream 17854 true scaffold_5: 38925943-38943796 Theobroma cacao
Thecc1EG026543 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38925943-38935942 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121525192 5273 Angiosperm View MSA
123826553 5264 Brassicales-Malvales View MSA
124321089 5266 SBM View MSA
124168898 5268 Malvidae View MSA
123892146 5270 Rosid View MSA
123474363 5271 Pentapetalae View MSA
122509639 5272 Eudicot View MSA
123429188 5275 Viridiplantae View MSA
121352494 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain