Gene : Thecc1EG026531 T. cacao v1.1

Defline:  (1 of 15) PTHR27005//PTHR27005:SF38 - FAMILY NOT NAMED // PROTEIN KINASE FAMILY PROTEIN-RELATED Genomic Order:  2988
Name:  ? Thecc1EG026531 Secondary Identifier:  ? PAC:27422218

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026531 0.5kb upstream 0.5kb upstream 2380 true scaffold_5: 38871461-38873840 Theobroma cacao
Thecc1EG026531 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38873341-38873840 Theobroma cacao
Thecc1EG026531 0.5kb downstream 0.5kb downstream 2380 true scaffold_5: 38870961-38873340 Theobroma cacao
Thecc1EG026531 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38870961-38871460 Theobroma cacao
Thecc1EG026531 1.0kb upstream 1.0kb upstream 2880 true scaffold_5: 38871461-38874340 Theobroma cacao
Thecc1EG026531 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38873341-38874340 Theobroma cacao
Thecc1EG026531 1.0kb downstream 1.0kb downstream 2880 true scaffold_5: 38870461-38873340 Theobroma cacao
Thecc1EG026531 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38870461-38871460 Theobroma cacao
Thecc1EG026531 2.0kb upstream 2.0kb upstream 3880 true scaffold_5: 38871461-38875340 Theobroma cacao
Thecc1EG026531 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38873341-38875340 Theobroma cacao
Thecc1EG026531 2.0kb downstream 2.0kb downstream 3880 true scaffold_5: 38869461-38873340 Theobroma cacao
Thecc1EG026531 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38869461-38871460 Theobroma cacao
Thecc1EG026531 5.0kb upstream 5.0kb upstream 6880 true scaffold_5: 38871461-38878340 Theobroma cacao
Thecc1EG026531 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38873341-38878340 Theobroma cacao
Thecc1EG026531 5.0kb downstream 5.0kb downstream 6880 true scaffold_5: 38866461-38873340 Theobroma cacao
Thecc1EG026531 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38866461-38871460 Theobroma cacao
Thecc1EG026531 10.0kb upstream 10.0kb upstream 11880 true scaffold_5: 38871461-38883340 Theobroma cacao
Thecc1EG026531 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38873341-38883340 Theobroma cacao
Thecc1EG026531 10.0kb downstream 10.0kb downstream 11880 true scaffold_5: 38861461-38873340 Theobroma cacao
Thecc1EG026531 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38861461-38871460 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841571 5264 Brassicales-Malvales View MSA
124351752 5266 SBM View MSA
124251696 5268 Malvidae View MSA
124074886 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain