Gene : Thecc1EG026525 T. cacao v1.1
Defline:  (1 of 6) PTHR23070//PTHR23070:SF5 - BCS1 AAA-TYPE ATPASE // AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  2982
Name:  ? Thecc1EG026525 Secondary Identifier:  ? PAC:27420884
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026525 0.5kb upstream 0.5kb upstream 1213 true scaffold_5: 38854615-38855827 Theobroma cacao
Thecc1EG026525 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38855328-38855827 Theobroma cacao
Thecc1EG026525 0.5kb downstream 0.5kb downstream 1213 true scaffold_5: 38854115-38855327 Theobroma cacao
Thecc1EG026525 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38854115-38854614 Theobroma cacao
Thecc1EG026525 1.0kb upstream 1.0kb upstream 1713 true scaffold_5: 38854615-38856327 Theobroma cacao
Thecc1EG026525 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38855328-38856327 Theobroma cacao
Thecc1EG026525 1.0kb downstream 1.0kb downstream 1713 true scaffold_5: 38853615-38855327 Theobroma cacao
Thecc1EG026525 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38853615-38854614 Theobroma cacao
Thecc1EG026525 2.0kb upstream 2.0kb upstream 2713 true scaffold_5: 38854615-38857327 Theobroma cacao
Thecc1EG026525 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38855328-38857327 Theobroma cacao
Thecc1EG026525 2.0kb downstream 2.0kb downstream 2713 true scaffold_5: 38852615-38855327 Theobroma cacao
Thecc1EG026525 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38852615-38854614 Theobroma cacao
Thecc1EG026525 5.0kb upstream 5.0kb upstream 5713 true scaffold_5: 38854615-38860327 Theobroma cacao
Thecc1EG026525 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38855328-38860327 Theobroma cacao
Thecc1EG026525 5.0kb downstream 5.0kb downstream 5713 true scaffold_5: 38849615-38855327 Theobroma cacao
Thecc1EG026525 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38849615-38854614 Theobroma cacao
Thecc1EG026525 10.0kb upstream 10.0kb upstream 10713 true scaffold_5: 38854615-38865327 Theobroma cacao
Thecc1EG026525 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38855328-38865327 Theobroma cacao
Thecc1EG026525 10.0kb downstream 10.0kb downstream 10713 true scaffold_5: 38844615-38855327 Theobroma cacao
Thecc1EG026525 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38844615-38854614 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820686 5264 Brassicales-Malvales Singleton cluster - no MSA
124316891 5266 SBM Singleton cluster - no MSA
124165677 5268 Malvidae Singleton cluster - no MSA
124074600 5270 Rosid View MSA
123749775 5271 Pentapetalae View MSA
122796053 5272 Eudicot View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain