Gene : Thecc1EG026517 T. cacao v1.1
Defline:  (1 of 9) PF05078 - Protein of unknown function (DUF679) (DUF679) Genomic Order:  2974
Name:  ? Thecc1EG026517 Secondary Identifier:  ? PAC:27425256
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026517 0.5kb upstream 0.5kb upstream 1493 true scaffold_5: 38811208-38812700 Theobroma cacao
Thecc1EG026517 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38811208-38811707 Theobroma cacao
Thecc1EG026517 0.5kb downstream 0.5kb downstream 1493 true scaffold_5: 38811708-38813200 Theobroma cacao
Thecc1EG026517 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38812701-38813200 Theobroma cacao
Thecc1EG026517 1.0kb upstream 1.0kb upstream 1993 true scaffold_5: 38810708-38812700 Theobroma cacao
Thecc1EG026517 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38810708-38811707 Theobroma cacao
Thecc1EG026517 1.0kb downstream 1.0kb downstream 1993 true scaffold_5: 38811708-38813700 Theobroma cacao
Thecc1EG026517 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38812701-38813700 Theobroma cacao
Thecc1EG026517 2.0kb upstream 2.0kb upstream 2993 true scaffold_5: 38809708-38812700 Theobroma cacao
Thecc1EG026517 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38809708-38811707 Theobroma cacao
Thecc1EG026517 2.0kb downstream 2.0kb downstream 2993 true scaffold_5: 38811708-38814700 Theobroma cacao
Thecc1EG026517 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38812701-38814700 Theobroma cacao
Thecc1EG026517 5.0kb upstream 5.0kb upstream 5993 true scaffold_5: 38806708-38812700 Theobroma cacao
Thecc1EG026517 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38806708-38811707 Theobroma cacao
Thecc1EG026517 5.0kb downstream 5.0kb downstream 5993 true scaffold_5: 38811708-38817700 Theobroma cacao
Thecc1EG026517 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38812701-38817700 Theobroma cacao
Thecc1EG026517 10.0kb upstream 10.0kb upstream 10993 true scaffold_5: 38801708-38812700 Theobroma cacao
Thecc1EG026517 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38801708-38811707 Theobroma cacao
Thecc1EG026517 10.0kb downstream 10.0kb downstream 10993 true scaffold_5: 38811708-38822700 Theobroma cacao
Thecc1EG026517 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38812701-38822700 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834804 5264 Brassicales-Malvales View MSA
124338020 5266 SBM View MSA
124237076 5268 Malvidae View MSA
124038325 5270 Rosid View MSA
123741760 5271 Pentapetalae View MSA
122770119 5272 Eudicot View MSA
122049061 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain