Gene : Pavir.8KG282900 P. virgatum v4.1
Defline:  (1 of 2) PTHR13343:SF13 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN Genomic Order:  2529
Name:  ? Pavir.8KG282900 Secondary Identifier:  ? PAC:37598168
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.8KG282900 0.5kb upstream 0.5kb upstream 4341 true Chr08K: 59361386-59365726 Panicum virgatum
Pavir.8KG282900 0.5kb upstream 0.5kb upstream 500 false Chr08K: 59361386-59361885 Panicum virgatum
Pavir.8KG282900 0.5kb downstream 0.5kb downstream 4341 true Chr08K: 59361886-59366226 Panicum virgatum
Pavir.8KG282900 0.5kb downstream 0.5kb downstream 500 false Chr08K: 59365727-59366226 Panicum virgatum
Pavir.8KG282900 1.0kb upstream 1.0kb upstream 4841 true Chr08K: 59360886-59365726 Panicum virgatum
Pavir.8KG282900 1.0kb upstream 1.0kb upstream 1000 false Chr08K: 59360886-59361885 Panicum virgatum
Pavir.8KG282900 1.0kb downstream 1.0kb downstream 4841 true Chr08K: 59361886-59366726 Panicum virgatum
Pavir.8KG282900 1.0kb downstream 1.0kb downstream 1000 false Chr08K: 59365727-59366726 Panicum virgatum
Pavir.8KG282900 2.0kb upstream 2.0kb upstream 5841 true Chr08K: 59359886-59365726 Panicum virgatum
Pavir.8KG282900 2.0kb upstream 2.0kb upstream 2000 false Chr08K: 59359886-59361885 Panicum virgatum
Pavir.8KG282900 2.0kb downstream 2.0kb downstream 5841 true Chr08K: 59361886-59367726 Panicum virgatum
Pavir.8KG282900 2.0kb downstream 2.0kb downstream 2000 false Chr08K: 59365727-59367726 Panicum virgatum
Pavir.8KG282900 5.0kb upstream 5.0kb upstream 8841 true Chr08K: 59356886-59365726 Panicum virgatum
Pavir.8KG282900 5.0kb upstream 5.0kb upstream 5000 false Chr08K: 59356886-59361885 Panicum virgatum
Pavir.8KG282900 5.0kb downstream 5.0kb downstream 8841 true Chr08K: 59361886-59370726 Panicum virgatum
Pavir.8KG282900 5.0kb downstream 5.0kb downstream 5000 false Chr08K: 59365727-59370726 Panicum virgatum
Pavir.8KG282900 10.0kb upstream 10.0kb upstream 13841 true Chr08K: 59351886-59365726 Panicum virgatum
Pavir.8KG282900 10.0kb upstream 10.0kb upstream 10000 false Chr08K: 59351886-59361885 Panicum virgatum
Pavir.8KG282900 10.0kb downstream 10.0kb downstream 13841 true Chr08K: 59361886-59375726 Panicum virgatum
Pavir.8KG282900 10.0kb downstream 10.0kb downstream 10000 false Chr08K: 59365727-59375726 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122085013 5267 Panicoideae Singleton cluster - no MSA
124589351 5269 Grass View MSA
122050575 5273 Angiosperm View MSA
121348228 5274 Embryophyte View MSA
123380781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain