Gene : Thecc1EG026748 T. cacao v1.1
Defline:  (1 of 30) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  3187
Name:  ? Thecc1EG026748 Secondary Identifier:  ? PAC:27422526
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026748 0.5kb upstream 0.5kb upstream 2806 true scaffold_5: 39883195-39886000 Theobroma cacao
Thecc1EG026748 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 39883195-39883694 Theobroma cacao
Thecc1EG026748 0.5kb downstream 0.5kb downstream 2806 true scaffold_5: 39883695-39886500 Theobroma cacao
Thecc1EG026748 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 39886001-39886500 Theobroma cacao
Thecc1EG026748 1.0kb upstream 1.0kb upstream 3306 true scaffold_5: 39882695-39886000 Theobroma cacao
Thecc1EG026748 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 39882695-39883694 Theobroma cacao
Thecc1EG026748 1.0kb downstream 1.0kb downstream 3306 true scaffold_5: 39883695-39887000 Theobroma cacao
Thecc1EG026748 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 39886001-39887000 Theobroma cacao
Thecc1EG026748 2.0kb upstream 2.0kb upstream 4306 true scaffold_5: 39881695-39886000 Theobroma cacao
Thecc1EG026748 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 39881695-39883694 Theobroma cacao
Thecc1EG026748 2.0kb downstream 2.0kb downstream 4306 true scaffold_5: 39883695-39888000 Theobroma cacao
Thecc1EG026748 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 39886001-39888000 Theobroma cacao
Thecc1EG026748 5.0kb upstream 5.0kb upstream 7306 true scaffold_5: 39878695-39886000 Theobroma cacao
Thecc1EG026748 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 39878695-39883694 Theobroma cacao
Thecc1EG026748 5.0kb downstream 5.0kb downstream 7306 true scaffold_5: 39883695-39891000 Theobroma cacao
Thecc1EG026748 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 39886001-39891000 Theobroma cacao
Thecc1EG026748 10.0kb upstream 10.0kb upstream 12306 true scaffold_5: 39873695-39886000 Theobroma cacao
Thecc1EG026748 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 39873695-39883694 Theobroma cacao
Thecc1EG026748 10.0kb downstream 10.0kb downstream 12306 true scaffold_5: 39883695-39896000 Theobroma cacao
Thecc1EG026748 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 39886001-39896000 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829185 5264 Brassicales-Malvales View MSA
124339338 5266 SBM View MSA
124243300 5268 Malvidae View MSA
124072342 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain