Gene : Pavir.1KG038100 P. virgatum v4.1
Defline:  (1 of 123) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  354
Name:  ? Pavir.1KG038100 Secondary Identifier:  ? PAC:37662566
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG038100 0.5kb upstream 0.5kb upstream 8332 true Chr01K: 3777985-3786316 Panicum virgatum
Pavir.1KG038100 0.5kb upstream 0.5kb upstream 500 false Chr01K: 3785817-3786316 Panicum virgatum
Pavir.1KG038100 0.5kb downstream 0.5kb downstream 8332 true Chr01K: 3777485-3785816 Panicum virgatum
Pavir.1KG038100 0.5kb downstream 0.5kb downstream 500 false Chr01K: 3777485-3777984 Panicum virgatum
Pavir.1KG038100 1.0kb upstream 1.0kb upstream 8832 true Chr01K: 3777985-3786816 Panicum virgatum
Pavir.1KG038100 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 3785817-3786816 Panicum virgatum
Pavir.1KG038100 1.0kb downstream 1.0kb downstream 8832 true Chr01K: 3776985-3785816 Panicum virgatum
Pavir.1KG038100 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 3776985-3777984 Panicum virgatum
Pavir.1KG038100 2.0kb upstream 2.0kb upstream 9832 true Chr01K: 3777985-3787816 Panicum virgatum
Pavir.1KG038100 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 3785817-3787816 Panicum virgatum
Pavir.1KG038100 2.0kb downstream 2.0kb downstream 9832 true Chr01K: 3775985-3785816 Panicum virgatum
Pavir.1KG038100 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 3775985-3777984 Panicum virgatum
Pavir.1KG038100 5.0kb upstream 5.0kb upstream 12832 true Chr01K: 3777985-3790816 Panicum virgatum
Pavir.1KG038100 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 3785817-3790816 Panicum virgatum
Pavir.1KG038100 5.0kb downstream 5.0kb downstream 12832 true Chr01K: 3772985-3785816 Panicum virgatum
Pavir.1KG038100 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 3772985-3777984 Panicum virgatum
Pavir.1KG038100 10.0kb upstream 10.0kb upstream 17832 true Chr01K: 3777985-3795816 Panicum virgatum
Pavir.1KG038100 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 3785817-3795816 Panicum virgatum
Pavir.1KG038100 10.0kb downstream 10.0kb downstream 17832 true Chr01K: 3767985-3785816 Panicum virgatum
Pavir.1KG038100 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 3767985-3777984 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179951 5267 Panicoideae View MSA
124579395 5269 Grass View MSA
122045808 5273 Angiosperm View MSA
121347981 5274 Embryophyte View MSA
123380700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain