Gene : Pavir.1KG029700 P. virgatum v4.1
Defline:  (1 of 5) 4.2.1.33 - 3-isopropylmalate dehydratase / Isopropylmalate isomerase Genomic Order:  273
Name:  ? Pavir.1KG029700 Secondary Identifier:  ? PAC:37664731
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum BRANCHED-CHAIN-AA-SYN-PWY Panicum virgatum pathologic  
Pvirgatum LEUSYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG029700 0.5kb upstream 0.5kb upstream 5794 true Chr01K: 3211933-3217726 Panicum virgatum
Pavir.1KG029700 0.5kb upstream 0.5kb upstream 500 false Chr01K: 3217227-3217726 Panicum virgatum
Pavir.1KG029700 0.5kb downstream 0.5kb downstream 5794 true Chr01K: 3211433-3217226 Panicum virgatum
Pavir.1KG029700 0.5kb downstream 0.5kb downstream 500 false Chr01K: 3211433-3211932 Panicum virgatum
Pavir.1KG029700 1.0kb upstream 1.0kb upstream 6294 true Chr01K: 3211933-3218226 Panicum virgatum
Pavir.1KG029700 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 3217227-3218226 Panicum virgatum
Pavir.1KG029700 1.0kb downstream 1.0kb downstream 6294 true Chr01K: 3210933-3217226 Panicum virgatum
Pavir.1KG029700 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 3210933-3211932 Panicum virgatum
Pavir.1KG029700 2.0kb upstream 2.0kb upstream 7294 true Chr01K: 3211933-3219226 Panicum virgatum
Pavir.1KG029700 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 3217227-3219226 Panicum virgatum
Pavir.1KG029700 2.0kb downstream 2.0kb downstream 7294 true Chr01K: 3209933-3217226 Panicum virgatum
Pavir.1KG029700 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 3209933-3211932 Panicum virgatum
Pavir.1KG029700 5.0kb upstream 5.0kb upstream 10294 true Chr01K: 3211933-3222226 Panicum virgatum
Pavir.1KG029700 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 3217227-3222226 Panicum virgatum
Pavir.1KG029700 5.0kb downstream 5.0kb downstream 10294 true Chr01K: 3206933-3217226 Panicum virgatum
Pavir.1KG029700 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 3206933-3211932 Panicum virgatum
Pavir.1KG029700 10.0kb upstream 10.0kb upstream 15294 true Chr01K: 3211933-3227226 Panicum virgatum
Pavir.1KG029700 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 3217227-3227226 Panicum virgatum
Pavir.1KG029700 10.0kb downstream 10.0kb downstream 15294 true Chr01K: 3201933-3217226 Panicum virgatum
Pavir.1KG029700 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 3201933-3211932 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030041 5273 Angiosperm View MSA
122200697 5267 Panicoideae View MSA
124468506 5269 Grass View MSA
121348898 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain