Gene : Pavir.1KG009000 P. virgatum v4.1
Defline:  (1 of 123) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  85
Name:  ? Pavir.1KG009000 Secondary Identifier:  ? PAC:37662824
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG009000 0.5kb upstream 0.5kb upstream 3095 true Chr01K: 1222413-1225507 Panicum virgatum
Pavir.1KG009000 0.5kb upstream 0.5kb upstream 500 false Chr01K: 1225008-1225507 Panicum virgatum
Pavir.1KG009000 0.5kb downstream 0.5kb downstream 3095 true Chr01K: 1221913-1225007 Panicum virgatum
Pavir.1KG009000 0.5kb downstream 0.5kb downstream 500 false Chr01K: 1221913-1222412 Panicum virgatum
Pavir.1KG009000 1.0kb upstream 1.0kb upstream 3595 true Chr01K: 1222413-1226007 Panicum virgatum
Pavir.1KG009000 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 1225008-1226007 Panicum virgatum
Pavir.1KG009000 1.0kb downstream 1.0kb downstream 3595 true Chr01K: 1221413-1225007 Panicum virgatum
Pavir.1KG009000 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 1221413-1222412 Panicum virgatum
Pavir.1KG009000 2.0kb upstream 2.0kb upstream 4595 true Chr01K: 1222413-1227007 Panicum virgatum
Pavir.1KG009000 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 1225008-1227007 Panicum virgatum
Pavir.1KG009000 2.0kb downstream 2.0kb downstream 4595 true Chr01K: 1220413-1225007 Panicum virgatum
Pavir.1KG009000 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 1220413-1222412 Panicum virgatum
Pavir.1KG009000 5.0kb upstream 5.0kb upstream 7595 true Chr01K: 1222413-1230007 Panicum virgatum
Pavir.1KG009000 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 1225008-1230007 Panicum virgatum
Pavir.1KG009000 5.0kb downstream 5.0kb downstream 7595 true Chr01K: 1217413-1225007 Panicum virgatum
Pavir.1KG009000 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 1217413-1222412 Panicum virgatum
Pavir.1KG009000 10.0kb upstream 10.0kb upstream 12595 true Chr01K: 1222413-1235007 Panicum virgatum
Pavir.1KG009000 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 1225008-1235007 Panicum virgatum
Pavir.1KG009000 10.0kb downstream 10.0kb downstream 12595 true Chr01K: 1212413-1225007 Panicum virgatum
Pavir.1KG009000 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 1212413-1222412 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179945 5267 Panicoideae View MSA
124571480 5269 Grass View MSA
122046453 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310608 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain