Gene : Thecc1EG026724 T. cacao v1.1
Defline:  (1 of 65) PF13947 - Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Genomic Order:  3165
Name:  ? Thecc1EG026724 Secondary Identifier:  ? PAC:27421028
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026724 0.5kb upstream 0.5kb upstream 1369 true scaffold_5: 39775842-39777210 Theobroma cacao
Thecc1EG026724 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 39775842-39776341 Theobroma cacao
Thecc1EG026724 0.5kb downstream 0.5kb downstream 1369 true scaffold_5: 39776342-39777710 Theobroma cacao
Thecc1EG026724 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 39777211-39777710 Theobroma cacao
Thecc1EG026724 1.0kb upstream 1.0kb upstream 1869 true scaffold_5: 39775342-39777210 Theobroma cacao
Thecc1EG026724 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 39775342-39776341 Theobroma cacao
Thecc1EG026724 1.0kb downstream 1.0kb downstream 1869 true scaffold_5: 39776342-39778210 Theobroma cacao
Thecc1EG026724 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 39777211-39778210 Theobroma cacao
Thecc1EG026724 2.0kb upstream 2.0kb upstream 2869 true scaffold_5: 39774342-39777210 Theobroma cacao
Thecc1EG026724 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 39774342-39776341 Theobroma cacao
Thecc1EG026724 2.0kb downstream 2.0kb downstream 2869 true scaffold_5: 39776342-39779210 Theobroma cacao
Thecc1EG026724 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 39777211-39779210 Theobroma cacao
Thecc1EG026724 5.0kb upstream 5.0kb upstream 5869 true scaffold_5: 39771342-39777210 Theobroma cacao
Thecc1EG026724 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 39771342-39776341 Theobroma cacao
Thecc1EG026724 5.0kb downstream 5.0kb downstream 5869 true scaffold_5: 39776342-39782210 Theobroma cacao
Thecc1EG026724 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 39777211-39782210 Theobroma cacao
Thecc1EG026724 10.0kb upstream 10.0kb upstream 10869 true scaffold_5: 39766342-39777210 Theobroma cacao
Thecc1EG026724 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 39766342-39776341 Theobroma cacao
Thecc1EG026724 10.0kb downstream 10.0kb downstream 10869 true scaffold_5: 39776342-39787210 Theobroma cacao
Thecc1EG026724 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 39777211-39787210 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820621 5264 Brassicales-Malvales Singleton cluster - no MSA
124348493 5266 SBM View MSA
124253653 5268 Malvidae View MSA
124070699 5270 Rosid View MSA
123749932 5271 Pentapetalae View MSA
122794455 5272 Eudicot View MSA
122051146 5273 Angiosperm View MSA
121312314 5274 Embryophyte View MSA
123349498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain