Gene : Pavir.1KG044100 P. virgatum v4.1
Defline:  (1 of 3) PTHR11764:SF15 - CYCLOARTENOL SYNTHASE Genomic Order:  407
Name:  ? Pavir.1KG044100 Secondary Identifier:  ? PAC:37667389
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-2541 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG044100 0.5kb upstream 0.5kb upstream 8686 true Chr01K: 4218749-4227434 Panicum virgatum
Pavir.1KG044100 0.5kb upstream 0.5kb upstream 500 false Chr01K: 4226935-4227434 Panicum virgatum
Pavir.1KG044100 0.5kb downstream 0.5kb downstream 8686 true Chr01K: 4218249-4226934 Panicum virgatum
Pavir.1KG044100 0.5kb downstream 0.5kb downstream 500 false Chr01K: 4218249-4218748 Panicum virgatum
Pavir.1KG044100 1.0kb upstream 1.0kb upstream 9186 true Chr01K: 4218749-4227934 Panicum virgatum
Pavir.1KG044100 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 4226935-4227934 Panicum virgatum
Pavir.1KG044100 1.0kb downstream 1.0kb downstream 9186 true Chr01K: 4217749-4226934 Panicum virgatum
Pavir.1KG044100 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 4217749-4218748 Panicum virgatum
Pavir.1KG044100 2.0kb upstream 2.0kb upstream 10186 true Chr01K: 4218749-4228934 Panicum virgatum
Pavir.1KG044100 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 4226935-4228934 Panicum virgatum
Pavir.1KG044100 2.0kb downstream 2.0kb downstream 10186 true Chr01K: 4216749-4226934 Panicum virgatum
Pavir.1KG044100 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 4216749-4218748 Panicum virgatum
Pavir.1KG044100 5.0kb upstream 5.0kb upstream 13186 true Chr01K: 4218749-4231934 Panicum virgatum
Pavir.1KG044100 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 4226935-4231934 Panicum virgatum
Pavir.1KG044100 5.0kb downstream 5.0kb downstream 13186 true Chr01K: 4213749-4226934 Panicum virgatum
Pavir.1KG044100 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 4213749-4218748 Panicum virgatum
Pavir.1KG044100 10.0kb upstream 10.0kb upstream 18186 true Chr01K: 4218749-4236934 Panicum virgatum
Pavir.1KG044100 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 4226935-4236934 Panicum virgatum
Pavir.1KG044100 10.0kb downstream 10.0kb downstream 18186 true Chr01K: 4208749-4226934 Panicum virgatum
Pavir.1KG044100 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 4208749-4218748 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028959 5273 Angiosperm View MSA
122195588 5267 Panicoideae View MSA
124584750 5269 Grass View MSA
121298379 5274 Embryophyte View MSA
123336355 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain