Gene : Thecc1EG026699 T. cacao v1.1
Defline:  (1 of 1) PTHR11759:SF8 - 30S RIBOSOMAL PROTEIN S11-RELATED Genomic Order:  3146
Name:  ? Thecc1EG026699 Secondary Identifier:  ? PAC:27422975
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026699 0.5kb upstream 0.5kb upstream 3917 true scaffold_5: 39632299-39636215 Theobroma cacao
Thecc1EG026699 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 39635716-39636215 Theobroma cacao
Thecc1EG026699 0.5kb downstream 0.5kb downstream 3917 true scaffold_5: 39631799-39635715 Theobroma cacao
Thecc1EG026699 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 39631799-39632298 Theobroma cacao
Thecc1EG026699 1.0kb upstream 1.0kb upstream 4417 true scaffold_5: 39632299-39636715 Theobroma cacao
Thecc1EG026699 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 39635716-39636715 Theobroma cacao
Thecc1EG026699 1.0kb downstream 1.0kb downstream 4417 true scaffold_5: 39631299-39635715 Theobroma cacao
Thecc1EG026699 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 39631299-39632298 Theobroma cacao
Thecc1EG026699 2.0kb upstream 2.0kb upstream 5417 true scaffold_5: 39632299-39637715 Theobroma cacao
Thecc1EG026699 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 39635716-39637715 Theobroma cacao
Thecc1EG026699 2.0kb downstream 2.0kb downstream 5417 true scaffold_5: 39630299-39635715 Theobroma cacao
Thecc1EG026699 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 39630299-39632298 Theobroma cacao
Thecc1EG026699 5.0kb upstream 5.0kb upstream 8417 true scaffold_5: 39632299-39640715 Theobroma cacao
Thecc1EG026699 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 39635716-39640715 Theobroma cacao
Thecc1EG026699 5.0kb downstream 5.0kb downstream 8417 true scaffold_5: 39627299-39635715 Theobroma cacao
Thecc1EG026699 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 39627299-39632298 Theobroma cacao
Thecc1EG026699 10.0kb upstream 10.0kb upstream 13417 true scaffold_5: 39632299-39645715 Theobroma cacao
Thecc1EG026699 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 39635716-39645715 Theobroma cacao
Thecc1EG026699 10.0kb downstream 10.0kb downstream 13417 true scaffold_5: 39622299-39635715 Theobroma cacao
Thecc1EG026699 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 39622299-39632298 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833324 5264 Brassicales-Malvales View MSA
124348983 5266 SBM View MSA
124249427 5268 Malvidae View MSA
124071530 5270 Rosid View MSA
123751156 5271 Pentapetalae View MSA
122793979 5272 Eudicot View MSA
122049746 5273 Angiosperm View MSA
121350914 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain