Gene : Pavir.1KG129000 P. virgatum v4.1
Defline:  (1 of 4) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  1755
Name:  ? Pavir.1KG129000 Secondary Identifier:  ? PAC:37666846
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum BRANCHED-CHAIN-AA-SYN-PWY Panicum virgatum pathologic  
Pvirgatum ILEUSYN-PWY Panicum virgatum pathologic  
Pvirgatum PWY-3001 Panicum virgatum pathologic  
Pvirgatum VALSYN-PWY Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG129000 0.5kb upstream 0.5kb upstream 4177 true Chr01K: 25782705-25786881 Panicum virgatum
Pavir.1KG129000 0.5kb upstream 0.5kb upstream 500 false Chr01K: 25782705-25783204 Panicum virgatum
Pavir.1KG129000 0.5kb downstream 0.5kb downstream 4177 true Chr01K: 25783205-25787381 Panicum virgatum
Pavir.1KG129000 0.5kb downstream 0.5kb downstream 500 false Chr01K: 25786882-25787381 Panicum virgatum
Pavir.1KG129000 1.0kb upstream 1.0kb upstream 4677 true Chr01K: 25782205-25786881 Panicum virgatum
Pavir.1KG129000 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 25782205-25783204 Panicum virgatum
Pavir.1KG129000 1.0kb downstream 1.0kb downstream 4677 true Chr01K: 25783205-25787881 Panicum virgatum
Pavir.1KG129000 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 25786882-25787881 Panicum virgatum
Pavir.1KG129000 2.0kb upstream 2.0kb upstream 5677 true Chr01K: 25781205-25786881 Panicum virgatum
Pavir.1KG129000 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 25781205-25783204 Panicum virgatum
Pavir.1KG129000 2.0kb downstream 2.0kb downstream 5677 true Chr01K: 25783205-25788881 Panicum virgatum
Pavir.1KG129000 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 25786882-25788881 Panicum virgatum
Pavir.1KG129000 5.0kb upstream 5.0kb upstream 8677 true Chr01K: 25778205-25786881 Panicum virgatum
Pavir.1KG129000 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 25778205-25783204 Panicum virgatum
Pavir.1KG129000 5.0kb downstream 5.0kb downstream 8677 true Chr01K: 25783205-25791881 Panicum virgatum
Pavir.1KG129000 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 25786882-25791881 Panicum virgatum
Pavir.1KG129000 10.0kb upstream 10.0kb upstream 13677 true Chr01K: 25773205-25786881 Panicum virgatum
Pavir.1KG129000 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 25773205-25783204 Panicum virgatum
Pavir.1KG129000 10.0kb downstream 10.0kb downstream 13677 true Chr01K: 25783205-25796881 Panicum virgatum
Pavir.1KG129000 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 25786882-25796881 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197042 5267 Panicoideae View MSA
124580502 5269 Grass View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain