Gene : Thecc1EG026686 T. cacao v1.1
Defline:  C2H2 and C2HC zinc fingers superfamily protein (16%T) Genomic Order:  3133
Name:  ? Thecc1EG026686 Secondary Identifier:  ? PAC:27422339
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026686 0.5kb upstream 0.5kb upstream 1992 true scaffold_5: 39569607-39571598 Theobroma cacao
Thecc1EG026686 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 39569607-39570106 Theobroma cacao
Thecc1EG026686 0.5kb downstream 0.5kb downstream 1992 true scaffold_5: 39570107-39572098 Theobroma cacao
Thecc1EG026686 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 39571599-39572098 Theobroma cacao
Thecc1EG026686 1.0kb upstream 1.0kb upstream 2492 true scaffold_5: 39569107-39571598 Theobroma cacao
Thecc1EG026686 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 39569107-39570106 Theobroma cacao
Thecc1EG026686 1.0kb downstream 1.0kb downstream 2492 true scaffold_5: 39570107-39572598 Theobroma cacao
Thecc1EG026686 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 39571599-39572598 Theobroma cacao
Thecc1EG026686 2.0kb upstream 2.0kb upstream 3492 true scaffold_5: 39568107-39571598 Theobroma cacao
Thecc1EG026686 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 39568107-39570106 Theobroma cacao
Thecc1EG026686 2.0kb downstream 2.0kb downstream 3492 true scaffold_5: 39570107-39573598 Theobroma cacao
Thecc1EG026686 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 39571599-39573598 Theobroma cacao
Thecc1EG026686 5.0kb upstream 5.0kb upstream 6492 true scaffold_5: 39565107-39571598 Theobroma cacao
Thecc1EG026686 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 39565107-39570106 Theobroma cacao
Thecc1EG026686 5.0kb downstream 5.0kb downstream 6492 true scaffold_5: 39570107-39576598 Theobroma cacao
Thecc1EG026686 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 39571599-39576598 Theobroma cacao
Thecc1EG026686 10.0kb upstream 10.0kb upstream 11492 true scaffold_5: 39560107-39571598 Theobroma cacao
Thecc1EG026686 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 39560107-39570106 Theobroma cacao
Thecc1EG026686 10.0kb downstream 10.0kb downstream 11492 true scaffold_5: 39570107-39581598 Theobroma cacao
Thecc1EG026686 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 39571599-39581598 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835248 5264 Brassicales-Malvales View MSA
124350971 5266 SBM View MSA
124254639 5268 Malvidae View MSA
124071436 5270 Rosid View MSA
123750865 5271 Pentapetalae View MSA
122773852 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain