Gene : Thecc1EG026666 T. cacao v1.1
Defline:  (1 of 4) PF04588 - Hypoxia induced protein conserved region (HIG_1_N) Genomic Order:  3113
Name:  ? Thecc1EG026666 Secondary Identifier:  ? PAC:27422012
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026666 0.5kb upstream 0.5kb upstream 4928 true scaffold_5: 39503216-39508143 Theobroma cacao
Thecc1EG026666 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 39503216-39503715 Theobroma cacao
Thecc1EG026666 0.5kb downstream 0.5kb downstream 4928 true scaffold_5: 39503716-39508643 Theobroma cacao
Thecc1EG026666 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 39508144-39508643 Theobroma cacao
Thecc1EG026666 1.0kb upstream 1.0kb upstream 5428 true scaffold_5: 39502716-39508143 Theobroma cacao
Thecc1EG026666 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 39502716-39503715 Theobroma cacao
Thecc1EG026666 1.0kb downstream 1.0kb downstream 5428 true scaffold_5: 39503716-39509143 Theobroma cacao
Thecc1EG026666 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 39508144-39509143 Theobroma cacao
Thecc1EG026666 2.0kb upstream 2.0kb upstream 6428 true scaffold_5: 39501716-39508143 Theobroma cacao
Thecc1EG026666 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 39501716-39503715 Theobroma cacao
Thecc1EG026666 2.0kb downstream 2.0kb downstream 6428 true scaffold_5: 39503716-39510143 Theobroma cacao
Thecc1EG026666 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 39508144-39510143 Theobroma cacao
Thecc1EG026666 5.0kb upstream 5.0kb upstream 9428 true scaffold_5: 39498716-39508143 Theobroma cacao
Thecc1EG026666 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 39498716-39503715 Theobroma cacao
Thecc1EG026666 5.0kb downstream 5.0kb downstream 9428 true scaffold_5: 39503716-39513143 Theobroma cacao
Thecc1EG026666 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 39508144-39513143 Theobroma cacao
Thecc1EG026666 10.0kb upstream 10.0kb upstream 14428 true scaffold_5: 39493716-39508143 Theobroma cacao
Thecc1EG026666 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 39493716-39503715 Theobroma cacao
Thecc1EG026666 10.0kb downstream 10.0kb downstream 14428 true scaffold_5: 39503716-39518143 Theobroma cacao
Thecc1EG026666 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 39508144-39518143 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833742 5264 Brassicales-Malvales View MSA
124343134 5266 SBM View MSA
124253339 5268 Malvidae View MSA
124071085 5270 Rosid View MSA
123747156 5271 Pentapetalae View MSA
122795420 5272 Eudicot View MSA
122049658 5273 Angiosperm View MSA
123428942 5275 Viridiplantae View MSA
121349742 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain