Gene : Pavir.1KG175600 P. virgatum v4.1
Defline:  (1 of 3) PTHR12741:SF22 - CALLOSE SYNTHASE 8-RELATED Genomic Order:  1336
Name:  ? Pavir.1KG175600 Secondary Identifier:  ? PAC:37666197
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6773 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG175600 0.5kb upstream 0.5kb upstream 24316 true Chr01K: 15390783-15415098 Panicum virgatum
Pavir.1KG175600 0.5kb upstream 0.5kb upstream 500 false Chr01K: 15390783-15391282 Panicum virgatum
Pavir.1KG175600 0.5kb downstream 0.5kb downstream 24316 true Chr01K: 15391283-15415598 Panicum virgatum
Pavir.1KG175600 0.5kb downstream 0.5kb downstream 500 false Chr01K: 15415099-15415598 Panicum virgatum
Pavir.1KG175600 1.0kb upstream 1.0kb upstream 24816 true Chr01K: 15390283-15415098 Panicum virgatum
Pavir.1KG175600 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 15390283-15391282 Panicum virgatum
Pavir.1KG175600 1.0kb downstream 1.0kb downstream 24816 true Chr01K: 15391283-15416098 Panicum virgatum
Pavir.1KG175600 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 15415099-15416098 Panicum virgatum
Pavir.1KG175600 2.0kb upstream 2.0kb upstream 25816 true Chr01K: 15389283-15415098 Panicum virgatum
Pavir.1KG175600 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 15389283-15391282 Panicum virgatum
Pavir.1KG175600 2.0kb downstream 2.0kb downstream 25816 true Chr01K: 15391283-15417098 Panicum virgatum
Pavir.1KG175600 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 15415099-15417098 Panicum virgatum
Pavir.1KG175600 5.0kb upstream 5.0kb upstream 28816 true Chr01K: 15386283-15415098 Panicum virgatum
Pavir.1KG175600 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 15386283-15391282 Panicum virgatum
Pavir.1KG175600 5.0kb downstream 5.0kb downstream 28816 true Chr01K: 15391283-15420098 Panicum virgatum
Pavir.1KG175600 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 15415099-15420098 Panicum virgatum
Pavir.1KG175600 10.0kb upstream 10.0kb upstream 33816 true Chr01K: 15381283-15415098 Panicum virgatum
Pavir.1KG175600 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 15381283-15391282 Panicum virgatum
Pavir.1KG175600 10.0kb downstream 10.0kb downstream 33816 true Chr01K: 15391283-15425098 Panicum virgatum
Pavir.1KG175600 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 15415099-15425098 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191843 5267 Panicoideae View MSA
124589873 5269 Grass View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain