Gene : Pavir.1KG166200 P. virgatum v4.1
Defline:  (1 of 6) PTHR20978:SF0 - SPLICING FACTOR 3B SUBUNIT 5 Genomic Order:  1424
Name:  ? Pavir.1KG166200 Secondary Identifier:  ? PAC:37667948
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG166200 0.5kb upstream 0.5kb upstream 2036 true Chr01K: 17231736-17233771 Panicum virgatum
Pavir.1KG166200 0.5kb upstream 0.5kb upstream 500 false Chr01K: 17231736-17232235 Panicum virgatum
Pavir.1KG166200 0.5kb downstream 0.5kb downstream 2036 true Chr01K: 17232236-17234271 Panicum virgatum
Pavir.1KG166200 0.5kb downstream 0.5kb downstream 500 false Chr01K: 17233772-17234271 Panicum virgatum
Pavir.1KG166200 1.0kb upstream 1.0kb upstream 2536 true Chr01K: 17231236-17233771 Panicum virgatum
Pavir.1KG166200 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 17231236-17232235 Panicum virgatum
Pavir.1KG166200 1.0kb downstream 1.0kb downstream 2536 true Chr01K: 17232236-17234771 Panicum virgatum
Pavir.1KG166200 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 17233772-17234771 Panicum virgatum
Pavir.1KG166200 2.0kb upstream 2.0kb upstream 3536 true Chr01K: 17230236-17233771 Panicum virgatum
Pavir.1KG166200 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 17230236-17232235 Panicum virgatum
Pavir.1KG166200 2.0kb downstream 2.0kb downstream 3536 true Chr01K: 17232236-17235771 Panicum virgatum
Pavir.1KG166200 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 17233772-17235771 Panicum virgatum
Pavir.1KG166200 5.0kb upstream 5.0kb upstream 6536 true Chr01K: 17227236-17233771 Panicum virgatum
Pavir.1KG166200 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 17227236-17232235 Panicum virgatum
Pavir.1KG166200 5.0kb downstream 5.0kb downstream 6536 true Chr01K: 17232236-17238771 Panicum virgatum
Pavir.1KG166200 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 17233772-17238771 Panicum virgatum
Pavir.1KG166200 10.0kb upstream 10.0kb upstream 11536 true Chr01K: 17222236-17233771 Panicum virgatum
Pavir.1KG166200 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 17222236-17232235 Panicum virgatum
Pavir.1KG166200 10.0kb downstream 10.0kb downstream 11536 true Chr01K: 17232236-17243771 Panicum virgatum
Pavir.1KG166200 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 17233772-17243771 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027648 5273 Angiosperm View MSA
122199156 5267 Panicoideae View MSA
124576348 5269 Grass View MSA
123428927 5275 Viridiplantae View MSA
121347588 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain