Gene : Pavir.1KG163900 P. virgatum v4.1
Defline:  (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  1442
Name:  ? Pavir.1KG163900 Secondary Identifier:  ? PAC:37665664
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-7511 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG163900 0.5kb upstream 0.5kb upstream 4443 true Chr01K: 18005618-18010060 Panicum virgatum
Pavir.1KG163900 0.5kb upstream 0.5kb upstream 500 false Chr01K: 18009561-18010060 Panicum virgatum
Pavir.1KG163900 0.5kb downstream 0.5kb downstream 4443 true Chr01K: 18005118-18009560 Panicum virgatum
Pavir.1KG163900 0.5kb downstream 0.5kb downstream 500 false Chr01K: 18005118-18005617 Panicum virgatum
Pavir.1KG163900 1.0kb upstream 1.0kb upstream 4943 true Chr01K: 18005618-18010560 Panicum virgatum
Pavir.1KG163900 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 18009561-18010560 Panicum virgatum
Pavir.1KG163900 1.0kb downstream 1.0kb downstream 4943 true Chr01K: 18004618-18009560 Panicum virgatum
Pavir.1KG163900 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 18004618-18005617 Panicum virgatum
Pavir.1KG163900 2.0kb upstream 2.0kb upstream 5943 true Chr01K: 18005618-18011560 Panicum virgatum
Pavir.1KG163900 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 18009561-18011560 Panicum virgatum
Pavir.1KG163900 2.0kb downstream 2.0kb downstream 5943 true Chr01K: 18003618-18009560 Panicum virgatum
Pavir.1KG163900 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 18003618-18005617 Panicum virgatum
Pavir.1KG163900 5.0kb upstream 5.0kb upstream 8943 true Chr01K: 18005618-18014560 Panicum virgatum
Pavir.1KG163900 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 18009561-18014560 Panicum virgatum
Pavir.1KG163900 5.0kb downstream 5.0kb downstream 8943 true Chr01K: 18000618-18009560 Panicum virgatum
Pavir.1KG163900 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 18000618-18005617 Panicum virgatum
Pavir.1KG163900 10.0kb upstream 10.0kb upstream 13943 true Chr01K: 18005618-18019560 Panicum virgatum
Pavir.1KG163900 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 18009561-18019560 Panicum virgatum
Pavir.1KG163900 10.0kb downstream 10.0kb downstream 13943 true Chr01K: 17995618-18009560 Panicum virgatum
Pavir.1KG163900 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 17995618-18005617 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196006 5267 Panicoideae View MSA
124586417 5269 Grass View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain