Gene : Thecc1EG047048 T. cacao v1.1
Defline:  (1 of 1) PTHR34550//PTHR34550:SF1 - FAMILY NOT NAMED // 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC Genomic Order:  191
Name:  ? Thecc1EG047048 Secondary Identifier:  ? PAC:27425481
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG047048 0.5kb upstream 0.5kb upstream 1241 true scaffold_5: 958228-959468 Theobroma cacao
Thecc1EG047048 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 958969-959468 Theobroma cacao
Thecc1EG047048 0.5kb downstream 0.5kb downstream 1241 true scaffold_5: 957728-958968 Theobroma cacao
Thecc1EG047048 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 957728-958227 Theobroma cacao
Thecc1EG047048 1.0kb upstream 1.0kb upstream 1741 true scaffold_5: 958228-959968 Theobroma cacao
Thecc1EG047048 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 958969-959968 Theobroma cacao
Thecc1EG047048 1.0kb downstream 1.0kb downstream 1741 true scaffold_5: 957228-958968 Theobroma cacao
Thecc1EG047048 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 957228-958227 Theobroma cacao
Thecc1EG047048 2.0kb upstream 2.0kb upstream 2741 true scaffold_5: 958228-960968 Theobroma cacao
Thecc1EG047048 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 958969-960968 Theobroma cacao
Thecc1EG047048 2.0kb downstream 2.0kb downstream 2741 true scaffold_5: 956228-958968 Theobroma cacao
Thecc1EG047048 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 956228-958227 Theobroma cacao
Thecc1EG047048 5.0kb upstream 5.0kb upstream 5741 true scaffold_5: 958228-963968 Theobroma cacao
Thecc1EG047048 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 958969-963968 Theobroma cacao
Thecc1EG047048 5.0kb downstream 5.0kb downstream 5741 true scaffold_5: 953228-958968 Theobroma cacao
Thecc1EG047048 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 953228-958227 Theobroma cacao
Thecc1EG047048 10.0kb upstream 10.0kb upstream 10741 true scaffold_5: 958228-968968 Theobroma cacao
Thecc1EG047048 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 958969-968968 Theobroma cacao
Thecc1EG047048 10.0kb downstream 10.0kb downstream 10741 true scaffold_5: 948228-958968 Theobroma cacao
Thecc1EG047048 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 948228-958227 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833826 5264 Brassicales-Malvales View MSA
124337512 5266 SBM View MSA
124238137 5268 Malvidae View MSA
124067793 5270 Rosid View MSA
123752888 5271 Pentapetalae View MSA
122792825 5272 Eudicot View MSA
122046754 5273 Angiosperm View MSA
121345882 5274 Embryophyte View MSA
123380282 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain