Gene : Thecc1EG046803 T. cacao v1.1
Defline:  (1 of 3) PTHR10366//PTHR10366:SF407 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  2184
Name:  ? Thecc1EG046803 Secondary Identifier:  ? PAC:27421142
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-361 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046803 0.5kb upstream 0.5kb upstream 5330 true scaffold_5: 33123737-33129066 Theobroma cacao
Thecc1EG046803 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 33128567-33129066 Theobroma cacao
Thecc1EG046803 0.5kb downstream 0.5kb downstream 5330 true scaffold_5: 33123237-33128566 Theobroma cacao
Thecc1EG046803 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 33123237-33123736 Theobroma cacao
Thecc1EG046803 1.0kb upstream 1.0kb upstream 5830 true scaffold_5: 33123737-33129566 Theobroma cacao
Thecc1EG046803 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 33128567-33129566 Theobroma cacao
Thecc1EG046803 1.0kb downstream 1.0kb downstream 5830 true scaffold_5: 33122737-33128566 Theobroma cacao
Thecc1EG046803 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 33122737-33123736 Theobroma cacao
Thecc1EG046803 2.0kb upstream 2.0kb upstream 6830 true scaffold_5: 33123737-33130566 Theobroma cacao
Thecc1EG046803 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 33128567-33130566 Theobroma cacao
Thecc1EG046803 2.0kb downstream 2.0kb downstream 6830 true scaffold_5: 33121737-33128566 Theobroma cacao
Thecc1EG046803 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 33121737-33123736 Theobroma cacao
Thecc1EG046803 5.0kb upstream 5.0kb upstream 9830 true scaffold_5: 33123737-33133566 Theobroma cacao
Thecc1EG046803 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 33128567-33133566 Theobroma cacao
Thecc1EG046803 5.0kb downstream 5.0kb downstream 9830 true scaffold_5: 33118737-33128566 Theobroma cacao
Thecc1EG046803 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 33118737-33123736 Theobroma cacao
Thecc1EG046803 10.0kb upstream 10.0kb upstream 14830 true scaffold_5: 33123737-33138566 Theobroma cacao
Thecc1EG046803 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 33128567-33138566 Theobroma cacao
Thecc1EG046803 10.0kb downstream 10.0kb downstream 14830 true scaffold_5: 33113737-33128566 Theobroma cacao
Thecc1EG046803 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 33113737-33123736 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824925 5264 Brassicales-Malvales View MSA
124320382 5266 SBM View MSA
124248773 5268 Malvidae View MSA
124072658 5270 Rosid View MSA
123749871 5271 Pentapetalae View MSA
122798457 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain