Gene : Thecc1EG026842 T. cacao v1.1
Defline:  (1 of 8) PTHR11945//PTHR11945:SF183 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED Genomic Order:  3270
Name:  ? Thecc1EG026842 Secondary Identifier:  ? PAC:27424460
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026842 0.5kb upstream 0.5kb upstream 10723 true scaffold_5: 40257441-40268163 Theobroma cacao
Thecc1EG026842 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 40267664-40268163 Theobroma cacao
Thecc1EG026842 0.5kb downstream 0.5kb downstream 10723 true scaffold_5: 40256941-40267663 Theobroma cacao
Thecc1EG026842 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 40256941-40257440 Theobroma cacao
Thecc1EG026842 1.0kb upstream 1.0kb upstream 11223 true scaffold_5: 40257441-40268663 Theobroma cacao
Thecc1EG026842 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 40267664-40268663 Theobroma cacao
Thecc1EG026842 1.0kb downstream 1.0kb downstream 11223 true scaffold_5: 40256441-40267663 Theobroma cacao
Thecc1EG026842 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 40256441-40257440 Theobroma cacao
Thecc1EG026842 2.0kb upstream 2.0kb upstream 12223 true scaffold_5: 40257441-40269663 Theobroma cacao
Thecc1EG026842 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 40267664-40269663 Theobroma cacao
Thecc1EG026842 2.0kb downstream 2.0kb downstream 12223 true scaffold_5: 40255441-40267663 Theobroma cacao
Thecc1EG026842 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 40255441-40257440 Theobroma cacao
Thecc1EG026842 5.0kb upstream 5.0kb upstream 15223 true scaffold_5: 40257441-40272663 Theobroma cacao
Thecc1EG026842 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 40267664-40272663 Theobroma cacao
Thecc1EG026842 5.0kb downstream 5.0kb downstream 15223 true scaffold_5: 40252441-40267663 Theobroma cacao
Thecc1EG026842 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 40252441-40257440 Theobroma cacao
Thecc1EG026842 10.0kb upstream 10.0kb upstream 20223 true scaffold_5: 40257441-40277663 Theobroma cacao
Thecc1EG026842 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 40267664-40277663 Theobroma cacao
Thecc1EG026842 10.0kb downstream 10.0kb downstream 20223 true scaffold_5: 40247441-40267663 Theobroma cacao
Thecc1EG026842 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 40247441-40257440 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841143 5264 Brassicales-Malvales View MSA
124347196 5266 SBM View MSA
124250364 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain