Gene : Thecc1EG026839 T. cacao v1.1

Defline:  (1 of 2) 5.1.1.17 - Isopenicillin-N epimerase Genomic Order:  3267
Name:  ? Thecc1EG026839 Secondary Identifier:  ? PAC:27421593

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026839 0.5kb upstream 0.5kb upstream 3970 true scaffold_5: 40245181-40249150 Theobroma cacao
Thecc1EG026839 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 40248651-40249150 Theobroma cacao
Thecc1EG026839 0.5kb downstream 0.5kb downstream 3970 true scaffold_5: 40244681-40248650 Theobroma cacao
Thecc1EG026839 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 40244681-40245180 Theobroma cacao
Thecc1EG026839 1.0kb upstream 1.0kb upstream 4470 true scaffold_5: 40245181-40249650 Theobroma cacao
Thecc1EG026839 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 40248651-40249650 Theobroma cacao
Thecc1EG026839 1.0kb downstream 1.0kb downstream 4470 true scaffold_5: 40244181-40248650 Theobroma cacao
Thecc1EG026839 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 40244181-40245180 Theobroma cacao
Thecc1EG026839 2.0kb upstream 2.0kb upstream 5470 true scaffold_5: 40245181-40250650 Theobroma cacao
Thecc1EG026839 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 40248651-40250650 Theobroma cacao
Thecc1EG026839 2.0kb downstream 2.0kb downstream 5470 true scaffold_5: 40243181-40248650 Theobroma cacao
Thecc1EG026839 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 40243181-40245180 Theobroma cacao
Thecc1EG026839 5.0kb upstream 5.0kb upstream 8470 true scaffold_5: 40245181-40253650 Theobroma cacao
Thecc1EG026839 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 40248651-40253650 Theobroma cacao
Thecc1EG026839 5.0kb downstream 5.0kb downstream 8470 true scaffold_5: 40240181-40248650 Theobroma cacao
Thecc1EG026839 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 40240181-40245180 Theobroma cacao
Thecc1EG026839 10.0kb upstream 10.0kb upstream 13470 true scaffold_5: 40245181-40258650 Theobroma cacao
Thecc1EG026839 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 40248651-40258650 Theobroma cacao
Thecc1EG026839 10.0kb downstream 10.0kb downstream 13470 true scaffold_5: 40235181-40248650 Theobroma cacao
Thecc1EG026839 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 40235181-40245180 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831603 5264 Brassicales-Malvales View MSA
124341234 5266 SBM View MSA
124247498 5268 Malvidae View MSA
124063514 5270 Rosid View MSA
123741535 5271 Pentapetalae View MSA
122792322 5272 Eudicot View MSA
122047079 5273 Angiosperm View MSA
121347897 5274 Embryophyte View MSA
123426680 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain