Gene : Thecc1EG026823 T. cacao v1.1
Defline:  (1 of 4) K00789 - S-adenosylmethionine synthetase (metK) Genomic Order:  3255
Name:  ? Thecc1EG026823 Secondary Identifier:  ? PAC:27423182
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ETHYL-PWY Theobroma cacao pathologic  
Tcacao PWY-5041 Theobroma cacao pathologic  
Tcacao PWY-7270 Theobroma cacao pathologic  
Tcacao PWY-7528 Theobroma cacao pathologic  
Tcacao SAM-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026823 0.5kb upstream 0.5kb upstream 3536 true scaffold_5: 40186740-40190275 Theobroma cacao
Thecc1EG026823 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 40186740-40187239 Theobroma cacao
Thecc1EG026823 0.5kb downstream 0.5kb downstream 3536 true scaffold_5: 40187240-40190775 Theobroma cacao
Thecc1EG026823 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 40190276-40190775 Theobroma cacao
Thecc1EG026823 1.0kb upstream 1.0kb upstream 4036 true scaffold_5: 40186240-40190275 Theobroma cacao
Thecc1EG026823 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 40186240-40187239 Theobroma cacao
Thecc1EG026823 1.0kb downstream 1.0kb downstream 4036 true scaffold_5: 40187240-40191275 Theobroma cacao
Thecc1EG026823 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 40190276-40191275 Theobroma cacao
Thecc1EG026823 2.0kb upstream 2.0kb upstream 5036 true scaffold_5: 40185240-40190275 Theobroma cacao
Thecc1EG026823 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 40185240-40187239 Theobroma cacao
Thecc1EG026823 2.0kb downstream 2.0kb downstream 5036 true scaffold_5: 40187240-40192275 Theobroma cacao
Thecc1EG026823 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 40190276-40192275 Theobroma cacao
Thecc1EG026823 5.0kb upstream 5.0kb upstream 8036 true scaffold_5: 40182240-40190275 Theobroma cacao
Thecc1EG026823 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 40182240-40187239 Theobroma cacao
Thecc1EG026823 5.0kb downstream 5.0kb downstream 8036 true scaffold_5: 40187240-40195275 Theobroma cacao
Thecc1EG026823 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 40190276-40195275 Theobroma cacao
Thecc1EG026823 10.0kb upstream 10.0kb upstream 13036 true scaffold_5: 40177240-40190275 Theobroma cacao
Thecc1EG026823 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 40177240-40187239 Theobroma cacao
Thecc1EG026823 10.0kb downstream 10.0kb downstream 13036 true scaffold_5: 40187240-40200275 Theobroma cacao
Thecc1EG026823 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 40190276-40200275 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837532 5264 Brassicales-Malvales View MSA
124340707 5266 SBM View MSA
124247554 5268 Malvidae View MSA
124071804 5270 Rosid View MSA
123752865 5271 Pentapetalae View MSA
122794208 5272 Eudicot View MSA
122047125 5273 Angiosperm View MSA
121349455 5274 Embryophyte View MSA
123428115 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain