Gene : Pavir.1KG420400 P. virgatum v4.1
Defline:  (1 of 6) 2.7.1.138 - Ceramide kinase / Acylsphingosine kinase Genomic Order:  3787
Name:  ? Pavir.1KG420400 Secondary Identifier:  ? PAC:37666852
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5129 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG420400 0.5kb upstream 0.5kb upstream 17419 true Chr01K: 65639308-65656726 Panicum virgatum
Pavir.1KG420400 0.5kb upstream 0.5kb upstream 500 false Chr01K: 65656227-65656726 Panicum virgatum
Pavir.1KG420400 0.5kb downstream 0.5kb downstream 17419 true Chr01K: 65638808-65656226 Panicum virgatum
Pavir.1KG420400 0.5kb downstream 0.5kb downstream 500 false Chr01K: 65638808-65639307 Panicum virgatum
Pavir.1KG420400 1.0kb upstream 1.0kb upstream 17919 true Chr01K: 65639308-65657226 Panicum virgatum
Pavir.1KG420400 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 65656227-65657226 Panicum virgatum
Pavir.1KG420400 1.0kb downstream 1.0kb downstream 17919 true Chr01K: 65638308-65656226 Panicum virgatum
Pavir.1KG420400 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 65638308-65639307 Panicum virgatum
Pavir.1KG420400 2.0kb upstream 2.0kb upstream 18919 true Chr01K: 65639308-65658226 Panicum virgatum
Pavir.1KG420400 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 65656227-65658226 Panicum virgatum
Pavir.1KG420400 2.0kb downstream 2.0kb downstream 18919 true Chr01K: 65637308-65656226 Panicum virgatum
Pavir.1KG420400 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 65637308-65639307 Panicum virgatum
Pavir.1KG420400 5.0kb upstream 5.0kb upstream 21919 true Chr01K: 65639308-65661226 Panicum virgatum
Pavir.1KG420400 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 65656227-65661226 Panicum virgatum
Pavir.1KG420400 5.0kb downstream 5.0kb downstream 21919 true Chr01K: 65634308-65656226 Panicum virgatum
Pavir.1KG420400 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 65634308-65639307 Panicum virgatum
Pavir.1KG420400 10.0kb upstream 10.0kb upstream 26919 true Chr01K: 65639308-65666226 Panicum virgatum
Pavir.1KG420400 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 65656227-65666226 Panicum virgatum
Pavir.1KG420400 10.0kb downstream 10.0kb downstream 26919 true Chr01K: 65629308-65656226 Panicum virgatum
Pavir.1KG420400 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 65629308-65639307 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188498 5267 Panicoideae View MSA
124580851 5269 Grass View MSA
122045057 5273 Angiosperm View MSA
121345163 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain