Gene : Pavir.1KG477000 P. virgatum v4.1
Defline:  (1 of 4) PTHR11349:SF44 - NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC Genomic Order:  4301
Name:  ? Pavir.1KG477000 Secondary Identifier:  ? PAC:37664954
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Ontology Annotation Displayer

20 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY0-162 Panicum virgatum pathologic  
Pvirgatum PWY-6126 Panicum virgatum pathologic  
Pvirgatum PWY-7176 Panicum virgatum pathologic  
Pvirgatum PWY-7184 Panicum virgatum pathologic  
Pvirgatum PWY-7196 Panicum virgatum pathologic  
Pvirgatum PWY-7197 Panicum virgatum pathologic  
Pvirgatum PWY-7200 Panicum virgatum pathologic  
Pvirgatum PWY-7205 Panicum virgatum pathologic  
Pvirgatum PWY-7208 Panicum virgatum pathologic  
Pvirgatum PWY-7210 Panicum virgatum pathologic  
Pvirgatum PWY-7211 Panicum virgatum pathologic  
Pvirgatum PWY-7220 Panicum virgatum pathologic  
Pvirgatum PWY-7221 Panicum virgatum pathologic  
Pvirgatum PWY-7222 Panicum virgatum pathologic  
Pvirgatum PWY-7224 Panicum virgatum pathologic  
Pvirgatum PWY-7226 Panicum virgatum pathologic  
Pvirgatum PWY-7227 Panicum virgatum pathologic  
Pvirgatum PWY-7228 Panicum virgatum pathologic  
Pvirgatum PWY-7229 Panicum virgatum pathologic  
Pvirgatum PWY-841 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG477000 0.5kb upstream 0.5kb upstream 7006 true Chr01K: 72544187-72551192 Panicum virgatum
Pavir.1KG477000 0.5kb upstream 0.5kb upstream 500 false Chr01K: 72544187-72544686 Panicum virgatum
Pavir.1KG477000 0.5kb downstream 0.5kb downstream 7006 true Chr01K: 72544687-72551692 Panicum virgatum
Pavir.1KG477000 0.5kb downstream 0.5kb downstream 500 false Chr01K: 72551193-72551692 Panicum virgatum
Pavir.1KG477000 1.0kb upstream 1.0kb upstream 7506 true Chr01K: 72543687-72551192 Panicum virgatum
Pavir.1KG477000 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 72543687-72544686 Panicum virgatum
Pavir.1KG477000 1.0kb downstream 1.0kb downstream 7506 true Chr01K: 72544687-72552192 Panicum virgatum
Pavir.1KG477000 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 72551193-72552192 Panicum virgatum
Pavir.1KG477000 2.0kb upstream 2.0kb upstream 8506 true Chr01K: 72542687-72551192 Panicum virgatum
Pavir.1KG477000 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 72542687-72544686 Panicum virgatum
Pavir.1KG477000 2.0kb downstream 2.0kb downstream 8506 true Chr01K: 72544687-72553192 Panicum virgatum
Pavir.1KG477000 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 72551193-72553192 Panicum virgatum
Pavir.1KG477000 5.0kb upstream 5.0kb upstream 11506 true Chr01K: 72539687-72551192 Panicum virgatum
Pavir.1KG477000 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 72539687-72544686 Panicum virgatum
Pavir.1KG477000 5.0kb downstream 5.0kb downstream 11506 true Chr01K: 72544687-72556192 Panicum virgatum
Pavir.1KG477000 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 72551193-72556192 Panicum virgatum
Pavir.1KG477000 10.0kb upstream 10.0kb upstream 16506 true Chr01K: 72534687-72551192 Panicum virgatum
Pavir.1KG477000 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 72534687-72544686 Panicum virgatum
Pavir.1KG477000 10.0kb downstream 10.0kb downstream 16506 true Chr01K: 72544687-72561192 Panicum virgatum
Pavir.1KG477000 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 72551193-72561192 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195967 5267 Panicoideae View MSA
124571700 5269 Grass View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain