Gene : Thecc1EG026789 T. cacao v1.1
Defline:  (1 of 21) PF04398 - Protein of unknown function, DUF538 (DUF538) Genomic Order:  3226
Name:  ? Thecc1EG026789 Secondary Identifier:  ? PAC:27422203
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026789 0.5kb upstream 0.5kb upstream 1296 true scaffold_5: 40079026-40080321 Theobroma cacao
Thecc1EG026789 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 40079026-40079525 Theobroma cacao
Thecc1EG026789 0.5kb downstream 0.5kb downstream 1296 true scaffold_5: 40079526-40080821 Theobroma cacao
Thecc1EG026789 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 40080322-40080821 Theobroma cacao
Thecc1EG026789 1.0kb upstream 1.0kb upstream 1796 true scaffold_5: 40078526-40080321 Theobroma cacao
Thecc1EG026789 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 40078526-40079525 Theobroma cacao
Thecc1EG026789 1.0kb downstream 1.0kb downstream 1796 true scaffold_5: 40079526-40081321 Theobroma cacao
Thecc1EG026789 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 40080322-40081321 Theobroma cacao
Thecc1EG026789 2.0kb upstream 2.0kb upstream 2796 true scaffold_5: 40077526-40080321 Theobroma cacao
Thecc1EG026789 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 40077526-40079525 Theobroma cacao
Thecc1EG026789 2.0kb downstream 2.0kb downstream 2796 true scaffold_5: 40079526-40082321 Theobroma cacao
Thecc1EG026789 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 40080322-40082321 Theobroma cacao
Thecc1EG026789 5.0kb upstream 5.0kb upstream 5796 true scaffold_5: 40074526-40080321 Theobroma cacao
Thecc1EG026789 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 40074526-40079525 Theobroma cacao
Thecc1EG026789 5.0kb downstream 5.0kb downstream 5796 true scaffold_5: 40079526-40085321 Theobroma cacao
Thecc1EG026789 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 40080322-40085321 Theobroma cacao
Thecc1EG026789 10.0kb upstream 10.0kb upstream 10796 true scaffold_5: 40069526-40080321 Theobroma cacao
Thecc1EG026789 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 40069526-40079525 Theobroma cacao
Thecc1EG026789 10.0kb downstream 10.0kb downstream 10796 true scaffold_5: 40079526-40090321 Theobroma cacao
Thecc1EG026789 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 40080322-40090321 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839785 5264 Brassicales-Malvales View MSA
124338834 5266 SBM View MSA
124238463 5268 Malvidae View MSA
124067274 5270 Rosid View MSA
123752755 5271 Pentapetalae View MSA
122794473 5272 Eudicot View MSA
122046318 5273 Angiosperm View MSA
121348392 5274 Embryophyte View MSA
123380844 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain