Gene : Pavir.1KG468100 P. virgatum v4.1
Defline:  (1 of 3) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  4218
Name:  ? Pavir.1KG468100 Secondary Identifier:  ? PAC:37662858
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ARGSYNBSUB-PWY Panicum virgatum pathologic  
Pvirgatum ARGSYN-PWY Panicum virgatum pathologic  
Pvirgatum CITRULBIO-PWY Panicum virgatum pathologic  
Pvirgatum CITRULLINE-DEG-PWY Panicum virgatum pathologic  
Pvirgatum PWY-4984 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG468100 0.5kb upstream 0.5kb upstream 6161 true Chr01K: 71871062-71877222 Panicum virgatum
Pavir.1KG468100 0.5kb upstream 0.5kb upstream 500 false Chr01K: 71871062-71871561 Panicum virgatum
Pavir.1KG468100 0.5kb downstream 0.5kb downstream 6161 true Chr01K: 71871562-71877722 Panicum virgatum
Pavir.1KG468100 0.5kb downstream 0.5kb downstream 500 false Chr01K: 71877223-71877722 Panicum virgatum
Pavir.1KG468100 1.0kb upstream 1.0kb upstream 6661 true Chr01K: 71870562-71877222 Panicum virgatum
Pavir.1KG468100 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 71870562-71871561 Panicum virgatum
Pavir.1KG468100 1.0kb downstream 1.0kb downstream 6661 true Chr01K: 71871562-71878222 Panicum virgatum
Pavir.1KG468100 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 71877223-71878222 Panicum virgatum
Pavir.1KG468100 2.0kb upstream 2.0kb upstream 7661 true Chr01K: 71869562-71877222 Panicum virgatum
Pavir.1KG468100 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 71869562-71871561 Panicum virgatum
Pavir.1KG468100 2.0kb downstream 2.0kb downstream 7661 true Chr01K: 71871562-71879222 Panicum virgatum
Pavir.1KG468100 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 71877223-71879222 Panicum virgatum
Pavir.1KG468100 5.0kb upstream 5.0kb upstream 10661 true Chr01K: 71866562-71877222 Panicum virgatum
Pavir.1KG468100 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 71866562-71871561 Panicum virgatum
Pavir.1KG468100 5.0kb downstream 5.0kb downstream 10661 true Chr01K: 71871562-71882222 Panicum virgatum
Pavir.1KG468100 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 71877223-71882222 Panicum virgatum
Pavir.1KG468100 10.0kb upstream 10.0kb upstream 15661 true Chr01K: 71861562-71877222 Panicum virgatum
Pavir.1KG468100 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 71861562-71871561 Panicum virgatum
Pavir.1KG468100 10.0kb downstream 10.0kb downstream 15661 true Chr01K: 71871562-71887222 Panicum virgatum
Pavir.1KG468100 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 71877223-71887222 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175374 5267 Panicoideae View MSA
124573214 5269 Grass View MSA
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain