Gene : Pavir.1KG470600 P. virgatum v4.1
Defline:  (1 of 3) K01956 - carbamoyl-phosphate synthase small subunit (carA, CPA1) Genomic Order:  4242
Name:  ? Pavir.1KG470600 Secondary Identifier:  ? PAC:37668562
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8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ARGSYNBSUB-PWY Panicum virgatum pathologic  
Pvirgatum ARGSYN-PWY Panicum virgatum pathologic  
Pvirgatum CITRULBIO-PWY Panicum virgatum pathologic  
Pvirgatum GLUTAMINDEG-PWY Panicum virgatum pathologic  
Pvirgatum PWY0-162 Panicum virgatum pathologic  
Pvirgatum PWY-4984 Panicum virgatum pathologic  
Pvirgatum PWY-5686 Panicum virgatum pathologic  
Pvirgatum PWY-7211 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG470600 0.5kb upstream 0.5kb upstream 5303 true Chr01K: 72044499-72049801 Panicum virgatum
Pavir.1KG470600 0.5kb upstream 0.5kb upstream 500 false Chr01K: 72044499-72044998 Panicum virgatum
Pavir.1KG470600 0.5kb downstream 0.5kb downstream 5303 true Chr01K: 72044999-72050301 Panicum virgatum
Pavir.1KG470600 0.5kb downstream 0.5kb downstream 500 false Chr01K: 72049802-72050301 Panicum virgatum
Pavir.1KG470600 1.0kb upstream 1.0kb upstream 5803 true Chr01K: 72043999-72049801 Panicum virgatum
Pavir.1KG470600 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 72043999-72044998 Panicum virgatum
Pavir.1KG470600 1.0kb downstream 1.0kb downstream 5803 true Chr01K: 72044999-72050801 Panicum virgatum
Pavir.1KG470600 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 72049802-72050801 Panicum virgatum
Pavir.1KG470600 2.0kb upstream 2.0kb upstream 6803 true Chr01K: 72042999-72049801 Panicum virgatum
Pavir.1KG470600 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 72042999-72044998 Panicum virgatum
Pavir.1KG470600 2.0kb downstream 2.0kb downstream 6803 true Chr01K: 72044999-72051801 Panicum virgatum
Pavir.1KG470600 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 72049802-72051801 Panicum virgatum
Pavir.1KG470600 5.0kb upstream 5.0kb upstream 9803 true Chr01K: 72039999-72049801 Panicum virgatum
Pavir.1KG470600 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 72039999-72044998 Panicum virgatum
Pavir.1KG470600 5.0kb downstream 5.0kb downstream 9803 true Chr01K: 72044999-72054801 Panicum virgatum
Pavir.1KG470600 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 72049802-72054801 Panicum virgatum
Pavir.1KG470600 10.0kb upstream 10.0kb upstream 14803 true Chr01K: 72034999-72049801 Panicum virgatum
Pavir.1KG470600 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 72034999-72044998 Panicum virgatum
Pavir.1KG470600 10.0kb downstream 10.0kb downstream 14803 true Chr01K: 72044999-72059801 Panicum virgatum
Pavir.1KG470600 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 72049802-72059801 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191073 5267 Panicoideae View MSA
124573496 5269 Grass View MSA
122046797 5273 Angiosperm View MSA
121347244 5274 Embryophyte View MSA
123423822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain