Gene : Thecc1EG026987 T. cacao v1.1
Defline:  Hydroxyproline-rich glycoprotein family protein (68%P) Genomic Order:  82
Name:  ? Thecc1EG026987 Secondary Identifier:  ? PAC:27439116
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026987 0.5kb upstream 0.5kb upstream 6007 true scaffold_6: 634327-640333 Theobroma cacao
Thecc1EG026987 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 634327-634826 Theobroma cacao
Thecc1EG026987 0.5kb downstream 0.5kb downstream 6007 true scaffold_6: 634827-640833 Theobroma cacao
Thecc1EG026987 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 640334-640833 Theobroma cacao
Thecc1EG026987 1.0kb upstream 1.0kb upstream 6507 true scaffold_6: 633827-640333 Theobroma cacao
Thecc1EG026987 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 633827-634826 Theobroma cacao
Thecc1EG026987 1.0kb downstream 1.0kb downstream 6507 true scaffold_6: 634827-641333 Theobroma cacao
Thecc1EG026987 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 640334-641333 Theobroma cacao
Thecc1EG026987 2.0kb upstream 2.0kb upstream 7507 true scaffold_6: 632827-640333 Theobroma cacao
Thecc1EG026987 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 632827-634826 Theobroma cacao
Thecc1EG026987 2.0kb downstream 2.0kb downstream 7507 true scaffold_6: 634827-642333 Theobroma cacao
Thecc1EG026987 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 640334-642333 Theobroma cacao
Thecc1EG026987 5.0kb upstream 5.0kb upstream 10507 true scaffold_6: 629827-640333 Theobroma cacao
Thecc1EG026987 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 629827-634826 Theobroma cacao
Thecc1EG026987 5.0kb downstream 5.0kb downstream 10507 true scaffold_6: 634827-645333 Theobroma cacao
Thecc1EG026987 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 640334-645333 Theobroma cacao
Thecc1EG026987 10.0kb upstream 10.0kb upstream 15507 true scaffold_6: 624827-640333 Theobroma cacao
Thecc1EG026987 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 624827-634826 Theobroma cacao
Thecc1EG026987 10.0kb downstream 10.0kb downstream 15507 true scaffold_6: 634827-650333 Theobroma cacao
Thecc1EG026987 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 640334-650333 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824263 5264 Brassicales-Malvales View MSA
124349175 5266 SBM View MSA
124246321 5268 Malvidae View MSA
124070187 5270 Rosid View MSA
123742417 5271 Pentapetalae View MSA
122794714 5272 Eudicot View MSA
122048183 5273 Angiosperm View MSA
121348939 5274 Embryophyte View MSA
123381088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain