Gene : Pavir.1KG556900 P. virgatum v4.1
Defline:  (1 of 5) PTHR12741//PTHR12741:SF17 - LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 // SUBFAMILY NOT NAMED Genomic Order:  5040
Name:  ? Pavir.1KG556900 Secondary Identifier:  ? PAC:37666137
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6773 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG556900 0.5kb upstream 0.5kb upstream 4747 true Chr01K: 79775283-79780029 Panicum virgatum
Pavir.1KG556900 0.5kb upstream 0.5kb upstream 500 false Chr01K: 79775283-79775782 Panicum virgatum
Pavir.1KG556900 0.5kb downstream 0.5kb downstream 4747 true Chr01K: 79775783-79780529 Panicum virgatum
Pavir.1KG556900 0.5kb downstream 0.5kb downstream 500 false Chr01K: 79780030-79780529 Panicum virgatum
Pavir.1KG556900 1.0kb upstream 1.0kb upstream 5247 true Chr01K: 79774783-79780029 Panicum virgatum
Pavir.1KG556900 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 79774783-79775782 Panicum virgatum
Pavir.1KG556900 1.0kb downstream 1.0kb downstream 5247 true Chr01K: 79775783-79781029 Panicum virgatum
Pavir.1KG556900 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 79780030-79781029 Panicum virgatum
Pavir.1KG556900 2.0kb upstream 2.0kb upstream 6247 true Chr01K: 79773783-79780029 Panicum virgatum
Pavir.1KG556900 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 79773783-79775782 Panicum virgatum
Pavir.1KG556900 2.0kb downstream 2.0kb downstream 6247 true Chr01K: 79775783-79782029 Panicum virgatum
Pavir.1KG556900 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 79780030-79782029 Panicum virgatum
Pavir.1KG556900 5.0kb upstream 5.0kb upstream 9247 true Chr01K: 79770783-79780029 Panicum virgatum
Pavir.1KG556900 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 79770783-79775782 Panicum virgatum
Pavir.1KG556900 5.0kb downstream 5.0kb downstream 9247 true Chr01K: 79775783-79785029 Panicum virgatum
Pavir.1KG556900 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 79780030-79785029 Panicum virgatum
Pavir.1KG556900 10.0kb upstream 10.0kb upstream 14247 true Chr01K: 79765783-79780029 Panicum virgatum
Pavir.1KG556900 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 79765783-79775782 Panicum virgatum
Pavir.1KG556900 10.0kb downstream 10.0kb downstream 14247 true Chr01K: 79775783-79790029 Panicum virgatum
Pavir.1KG556900 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 79780030-79790029 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195171 5267 Panicoideae View MSA
124589873 5269 Grass View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain