Gene : Thecc1EG026967 T. cacao v1.1
Defline:  (1 of 1) 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase Genomic Order:  68
Name:  ? Thecc1EG026967 Secondary Identifier:  ? PAC:27437665
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1269 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026967 0.5kb upstream 0.5kb upstream 9734 true scaffold_6: 528971-538704 Theobroma cacao
Thecc1EG026967 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 528971-529470 Theobroma cacao
Thecc1EG026967 0.5kb downstream 0.5kb downstream 9734 true scaffold_6: 529471-539204 Theobroma cacao
Thecc1EG026967 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 538705-539204 Theobroma cacao
Thecc1EG026967 1.0kb upstream 1.0kb upstream 10234 true scaffold_6: 528471-538704 Theobroma cacao
Thecc1EG026967 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 528471-529470 Theobroma cacao
Thecc1EG026967 1.0kb downstream 1.0kb downstream 10234 true scaffold_6: 529471-539704 Theobroma cacao
Thecc1EG026967 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 538705-539704 Theobroma cacao
Thecc1EG026967 2.0kb upstream 2.0kb upstream 11234 true scaffold_6: 527471-538704 Theobroma cacao
Thecc1EG026967 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 527471-529470 Theobroma cacao
Thecc1EG026967 2.0kb downstream 2.0kb downstream 11234 true scaffold_6: 529471-540704 Theobroma cacao
Thecc1EG026967 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 538705-540704 Theobroma cacao
Thecc1EG026967 5.0kb upstream 5.0kb upstream 14234 true scaffold_6: 524471-538704 Theobroma cacao
Thecc1EG026967 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 524471-529470 Theobroma cacao
Thecc1EG026967 5.0kb downstream 5.0kb downstream 14234 true scaffold_6: 529471-543704 Theobroma cacao
Thecc1EG026967 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 538705-543704 Theobroma cacao
Thecc1EG026967 10.0kb upstream 10.0kb upstream 19234 true scaffold_6: 519471-538704 Theobroma cacao
Thecc1EG026967 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 519471-529470 Theobroma cacao
Thecc1EG026967 10.0kb downstream 10.0kb downstream 19234 true scaffold_6: 529471-548704 Theobroma cacao
Thecc1EG026967 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 538705-548704 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829711 5264 Brassicales-Malvales View MSA
124345040 5266 SBM View MSA
124244021 5268 Malvidae View MSA
124065016 5270 Rosid View MSA
123738710 5271 Pentapetalae View MSA
122788202 5272 Eudicot View MSA
122050140 5273 Angiosperm View MSA
121346522 5274 Embryophyte View MSA
123424720 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain